DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mirr and irx7

DIOPT Version :9

Sequence 1:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_571956.1 Gene:irx7 / 140746 ZFINID:ZDB-GENE-020103-1 Length:314 Species:Danio rerio


Alignment Length:403 Identity:117/403 - (29%)
Similarity:156/403 - (38%) Gaps:164/403 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LPA-LSLVGAPP----PGPHSSAPGGAPAPGAGNPPNRCCDTGRTIYTDPVSGQTICSCQYDMLN 145
            :|| ..|:|.||    |.||.....|.|.|.:|.|                              
Zfish    19 MPAGYQLLGCPPGMQQPPPHLVGMAGMPLPFSGIP------------------------------ 53

  Fly   146 YQRLAAAGGVPLGVYPE-GMSAYLSGIAADQPPFYANPAGIDLKENLVAGASPW---------PY 200
                    |.....||. |..|::|.             ..|||     .|||:         ||
Zfish    54 --------GYSFIPYPHPGHMAHISN-------------SYDLK-----AASPYHQALLGRGGPY 92

  Fly   201 PSMYHPYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITK 265
            .:.|.|..|            |......|.||||:||.|||||:||.|||||||||||||||:||
Zfish    93 YTPYRPIPA------------DDPSRVTKVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTK 145

  Fly   266 MTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDD------KNTEDNDLLDAKDSGV 324
            |:|||||||||||||||||||:::|..:.:.|::|...:.:.:      |.|||.|.:|.:    
Zfish   146 MSLTQVSTWFANARRRLKKENRVSWASKGKSDEEDEEEEGESEEEGSLRKGTEDEDEIDPQ---- 206

  Fly   325 GSTDDKDRSGRLGDMMTDRPGESNNSEWSESRPGSPNGSPDLYDRPGSMPPGAHPLFHPAALHHH 389
             :.||:|..    |::..:..|                               |.|         
Zfish   207 -TVDDEDEE----DVVVSKSVE-------------------------------HRL--------- 226

  Fly   390 FRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQT------AVGGTAKPRIWSLADMASKDSKDS 448
                ||.              |:|.:::.::...|      .:....||:|||||:.|:.|....
Zfish   227 ----AGG--------------LEQQKESDKSDTLTKRESYKQIADVQKPKIWSLAETATSDIVKK 273

  Fly   449 SSGAKDNHPELPP 461
            .|..|  |.:..|
Zfish   274 PSDLK--HLQTSP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 34/38 (89%)
irx7NP_571956.1 Homeobox_KN 122..161 CDD:283551 34/38 (89%)
IRO 255..269 CDD:214716 8/13 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.880

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