Protein Alignment caup and pknox1.1

DIOPT Version :9

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_571966.3
• Gene: pknox1.1 / 798151
• ZFINID: ZDB-GENE-020122-5
• Length: 433
• Species: Danio rerio
• Alignment Length: 278
• Identity: 68/278 - (24%)
• Similarity: 104/278 - (37%)
• Gaps: 90/278 - (32%)

  Fly   154 GGPY-PSNEQ--NPYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQST---TGYYSYD 212
            |.|| |.::|  ||          |..||| |..:...|...:..:.|..::.|:   ||...|.
Zfish   167 GSPYSPVHDQLSNP----------FSGPLS-PQSLLIPSSGLQQGSVTVTTVNSSQVATGNTVYQ 220

  Fly   213 PTLAAYGYGP----------------------NYDLA----------ARRKNATRESTATLKAWL 245
            |.......|.                      |.||:          .:|....:::|..:::||
Zfish   221 PVTVVTPQGQVVTQAISPGALHIQNSQLQLQLNQDLSFFGGDDSSPKNKRGVLPKQATNVMRSWL 285

  Fly   246 SEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL-------------KKENKMTW-EPKN 296
            .:|..:||||:.||..:|..|.:||.||:.||.|||||:             |.:.|:.. .|.:
Zfish   286 FQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRILQPMLDANSTEASKSKKKVAQSRPLH 350

  Fly   297 KTEDDD-------------DGM-----MSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKE 343
            :...|.             ||.     |:.|..:..:.||..|:.:....||.        :|.|
Zfish   351 RFWSDSIASTGSQQQLTMPDGSLVTVGMNVDGFQALSSDGATLAMQQVLMGNH--------SEDE 407

  Fly   344 VDSSGDQKLDLDREPHNL 361
            .|.||::. |.|....|:
Zfish   408 TDESGNED-DTDMSTANM 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	244..283	CDD:283551	20/38 (53%)
		IRO	455..472	CDD:214716
pknox1.1	NP_571966.3	Meis_PKNOX_N	82..166	CDD:293102
		Homeobox_KN	284..323	CDD:283551	20/38 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900