DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment caup and IRX1

DIOPT Version :9

Sequence 1:NP_524046.2 Gene:caup / 39440 FlyBaseID:FBgn0015919 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_077313.3 Gene:IRX1 / 79192 HGNCID:14358 Length:480 Species:Homo sapiens


Alignment Length:578 Identity:164/578 - (28%)
Similarity:235/578 - (40%) Gaps:188/578 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GGDVPVGLSSAAQDLPSRGSCCENGRPIITDPVSGQTVCSCQYDPARLAIGGYSRMALPSGGVGV 150
            ||:.|..|::||    :..:...:||                  |....:||.:..|..:..:|:
Human    21 GGERPGVLAAAA----AAAAAASSGR------------------PGAAELGGGAGAAAVTSVLGM 63

  Fly   151 GVYGGPYPSNEQN-----PYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYS 210
            ....||| :...|     ||.:    :.:.::.:.:.|.:|| :|....:.:.:   .:...||.
Human    64 YAAAGPY-AGAPNYSAFLPYAA----DLSLFSQMGSQYELKD-NPGVHPATFAA---HTAPAYYP 119

  Fly   211 YDPTLAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVST 275
            |    ..:.||.    ..|.||||||||:||||||:||:||||||||||||||||||||||||||
Human   120 Y----GQFQYGD----PGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST 176

  Fly   276 WFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKD---AGDGGKLSTEAFDPGNQLIKSEL 337
            ||||||||||||||:||..::|  |.:||.:...:.|.|   |.|..::..|:.|          
Human   177 WFANARRRLKKENKVTWGARSK--DQEDGALFGSDTEGDPEKAEDDEEIDLESID---------- 229

  Fly   338 GKAEKEVDSSGDQKLDLDREPHNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQ 402
              .:|..:..|||..:.|.:       :..||:|.        ||.|:.|:...:          
Human   230 --IDKIDEHDGDQSNEDDED-------KAEAPHAP--------AAPSALARDQGS---------- 267

  Fly   403 HHQQQQQQQQNQQQLQHHQMDQPYYHPGGYGQE--ESGEFAAQKNPLSRDCGIP-VPASKPKIWS 464
                         .|....:.:|...|.|..:|  |.|. ....:|.:...|:. .|..||||||
Human   268 -------------PLAAADVLKPQDSPLGLAKEAPEPGS-TRLLSPGAAAGGLQGAPHGKPKIWS 318

  Fly   465 VADTAAC------KTPPPTAAYLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHP-- 521
            :|:||..      .:|||.|.:.|.  :.||:.      .|||                  ||  
Human   319 LAETATSPDGAPKASPPPPAGHPGA--HGPSAG------APLQ------------------HPAF 357

  Fly   522 ---HHHHPHH-----------SMELGSPLSMMSSYAGGSPYSRIPTAYTEAMGMHLPSSSSSSSS 572
               |..:..|           .:..||.|:|.|....|:|::       ...|.|||:       
Human   358 LPSHGLYTCHIGKFSNWTNSAFLAQGSLLNMRSFLGVGAPHA-------APHGPHLPA------- 408

  Fly   573 TGKLPPTHIHPAPQRVGFPEIQPDTPPQTPPTMKLNSSGGSSSSSGSSHSSSMHSVTP 630
                ||                   |||.|..:...:..|..:|..||.:.....:.|
Human   409 ----PP-------------------PPQPPVAIAPGALNGDKASVRSSPTLPERDLVP 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caupNP_524046.2 Homeobox_KN 244..283 CDD:283551 36/38 (95%)
IRO 455..472 CDD:214716 10/22 (45%)
IRX1NP_077313.3 Homeobox_KN 145..184 CDD:399131 36/38 (95%)
HARE-HTH <188..247 CDD:412843 20/72 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..268 25/129 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..354 27/100 (27%)
IRO <313..326 CDD:214716 9/12 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..480 15/73 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
65.880

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