DRSC/TRiP Functional Genomics Resources

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Protein Alignment caup and MEIS3

DIOPT Version :10

Sequence 1:NP_524046.2 Gene:caup / 39440 FlyBaseID:FBgn0015919 Length:693 Species:Drosophila melanogaster
Sequence 2:XP_024307380.1 Gene:MEIS3 / 56917 HGNCID:29537 Length:509 Species:Homo sapiens


Alignment Length:283 Identity:64/283 - (22%)
Similarity:92/283 - (32%) Gaps:127/283 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 YPSNEQNPYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWT----SASLQSTTGYYSYD----- 212
            ||::    .||:         |..|...|:|...|..:...|    |..|.|.:|..|.|     
Human   277 YPAS----CPSL---------PDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL 328

  Fly   213 --PTLAAYGYGPNYDL-AARRKNATR-----ESTATLKAWLSEH--------------------- 248
              ...:....|.:.|| ..||:|..|     .:|..::|||.:|                     
Human   329 DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPS 393

  Fly   249 -------------------------KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 288
                                     .::|||::.:|..||..|.:|:.||:.||.|||||:.:. 
Human   394 PGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP- 457

  Fly   289 KMTWEPKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQKLD 353
              ..:..|:|                 |.|.     ||.|..|.|.   |..|            
Human   458 --MIDQSNRT-----------------GQGA-----AFSPEGQPIG---GYTE------------ 483

  Fly   354 LDREPHNLVAMRGLAPYATPPGA 376
              .:||  ||:|       |||:
Human   484 --TQPH--VAVR-------PPGS 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caupNP_524046.2 Homeobox_KN 245..283 CDD:428673 17/83 (20%)
IRO 455..472 CDD:214716
MEIS3XP_024307380.1 Meis_PKNOX_N 184..268 CDD:465140
Homeobox_KN 419..453 CDD:428673 15/33 (45%)
Blue background indicates that the domain is not in the aligned region.

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