Protein Alignment caup and Tgif2

DIOPT Version :10

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_001128455.1
• Gene: Tgif2 / 499929
• RGDID: 1560115
• Length: 237
• Species: Rattus norvegicus
• Alignment Length: 326
• Identity: 74/326 - (22%)
• Similarity: 107/326 - (32%)
• Gaps: 121/326 - (37%)

  Fly   229 RRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 293
            ||.|..:||...|:.||..|:.|.||::.||:.|:..|.:::.|:..||.||||||..:
  Rat    21 RRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLLPD------ 79

  Fly   294 PKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQKLDLDREP 358
                       |:..|.|               ||....|....|||
  Rat    80 -----------MLRKDGK---------------DPNQFTISRRGGKA------------------ 100

  Fly   359 HNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQNQQQLQHHQMD 423
                     :..|.|.|:.|...|.|.          |.|..|               |......
  Rat   101 ---------SDVALPRGSSPSLLAVSV----------PAPTNM---------------LSLSVCS 131

  Fly   424 QPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAA-----CKTPPPTAAYLGQ 483
            .|.:  .|.|::.:..|...:  |.....:..|.|...:.:.|:..:     ..|||||
  Rat   132 MPLH--SGQGEKPAASFPQVE--LESPKALVTPGSTLTLLTRAEAGSPTGGLFNTPPPT------ 186

  Fly   484 NFYPPS------SADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGSPLSMMSSY 542
               ||.      |:.|.|....||:..:.:|    |:||....|..|         :||.::|..
  Rat   187 ---PPEQDKDDFSSFQLLVEVALQRAAEMEL----QKQQDPAPPLLH---------TPLPLVSEN 235

  Fly   543 A 543
            |
  Rat   236 A 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	245..283	CDD:428673	15/37 (41%)
		IRO	455..472	CDD:214716	3/21 (14%)
Tgif2	NP_001128455.1	Homeobox_KN	37..75	CDD:428673	15/37 (41%)