Protein Alignment caup and ara

DIOPT Version :10

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_524045.2
• Gene: ara / 39439
• FlyBaseID: FBgn0015904
• Length: 717
• Species: Drosophila melanogaster
• Alignment Length: 750
• Identity: 326/750 - (43%)
• Similarity: 392/750 - (52%)
• Gaps: 182/750 - (24%)

  Fly     1 MAAYAQFGYAGYPTANQL------TTANTDSQSGHGGGSPLSGTNEASLSPSGGSTATG------ 53
            ||||.||||.|:|:|:||      ||.:..:.........|..||..::||:||....|
  Fly     1 MAAYTQFGYGGFPSASQLLPPSVQTTEDASANVNVNVNEALVMTNAPAMSPTGGQDCQGSQPSGG 65

  Fly    54 ----LTAGPLSPGAVSQSSHHA---GHKGLSTS----PAEDVVGGDVP---VGLSSAAQDLPSRG 104
                .::|.|||.|:||:|:.|   |..|.|::    ||:...||.:.   ||.:..|......|
  Fly    66 AGGDASSGALSPNALSQNSNAATVVGAGGGSSAGGGGPADLATGGSLDGNGVGTTPTAGGAGGGG 130

  Fly   105 SCCENGRPIITDPVSGQTVCSCQYDPARLAIGGYSRMALPSGGVGVGVYGGPYPSNEQNPYPSIG 169
            |||||||||:|||||||||||||||.||||:..|||:...|    |||||.||||.:||||.|||
  Fly   131 SCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRLPAAS----VGVYGTPYPSTDQNPYQSIG 191

  Fly   170 VDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTLAAYG--------YGPNYDL 226
            ||:||||:|||||||:|||....||.|||||.||.||||||||| ::|||        ||.:|||
  Fly   192 VDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDP-MSAYGGLLVSNSSYGASYDL 255

  Fly   227 AARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 291
            |||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||
  Fly   256 AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 320

  Fly   292 WEPKNKTEDDDDGMMSDDEKEKD-----AGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQK 351
            |||||:|:||||.::|||||:|:     .|..|.:|         |.|.|..:.|..:|.  |||
  Fly   321 WEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVS---------LAKDETKEEEDAIDE--DQK 374

  Fly   352 LDLDREPHNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQNQQ- 415
              ...:.:.|.|..|.....:..|.:|.....||   .|....||:     |||.....|..||
  Fly   375 --CLGQANILRAGFGYPSAGSGSGGYPGGGGSSS---GHPGGYHPY-----HHQHPAYYQAGQQG 429

  Fly   416 -QLQHHQMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAA 479
             .|..|          |...:...:....||.|.||||:|:||:||||||:|||..||||||  |
  Fly   430 GMLPFH----------GENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTVGCKTPPP--A 482

  Fly   480 YLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPH---------------HHHPH-- 527
            |:|              ||.:...||||.||.|||.||.:.|.               :..||
  Fly   483 YMG--------------HQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAAPYLRPHTT 533

  Fly   528 -HSMELGSPLSMMSSYAGGSPYSRIPTAYTEAMGMHLP-----SSSSSSSSTGKLPPTHIH---- 582
             :...||:....:.:.....|||.:|....:.......     :..::.||:|.:.|...|
  Fly   534 AYGGFLGATTQQLHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHP 598

  Fly   583 ------------PAPQR-VGFPEIQPDTPPQTPPTMKL--------------------------- 607
                        .|.|| :||.|.||||||||||.||:
  Fly   599 QQQQQLQQQSQSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSLLPTATQVPMTATCRSSNAFG 663

  Fly   608 ----------------------NSSGGSSSSSGSS 620
                                  .|||.|||||.||
  Fly   664 FPASGYPMNFSARLGEYSPRDDYSSGNSSSSSSSS 698

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	245..283	CDD:428673	36/37 (97%)
		IRO	455..472	CDD:214716	11/16 (69%)
ara	NP_524045.2	COG5576	<237..>318	CDD:227863	68/80 (85%)
		Homeobox_KN	274..312	CDD:428673	36/37 (97%)