Protein Alignment caup and irx2a

DIOPT Version :10

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_957351.1
• Gene: irx2a / 394032
• ZFINID: ZDB-GENE-040426-1446
• Length: 432
• Species: Danio rerio
• Alignment Length: 428
• Identity: 133/428 - (31%)
• Similarity: 173/428 - (40%)
• Gaps: 157/428 - (36%)

  Fly   141 MALPSGGV-----GVGVYGGPY--PSNEQ----------NPYP---SIGVDNSAFYAPLSNPYGI 185
            |:.|.|.:     .:.:|..|.  |.:|.          :|||   :.....:.|.:||  ||
Zfish     1 MSYPQGYLYQPPGSLALYSCPLAAPRSEDLARSSSGSAFSPYPGSAAFTASANGFSSPL--PY-- 61

  Fly   186 KDTSPSTEMSAWTSASLQSTT----GYYSYDPTLAAYGYGPNYDL----AARRKNATRESTATLK 242
             .|.|:|...::..:...:.|    |..||.|    || .|.|..    .|.||||||::|||||
Zfish    62 -STDPATGFPSYMGSPYDAHTTGMAGAISYHP----YG-SPGYPYQLNDPAYRKNATRDATATLK 120

  Fly   243 AWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTEDDD----D 303
            |||.||:||||||||:||||||||||||||||||||||||||||||||||.|:||:||:|    |
Zfish   121 AWLQEHRKNPYPTKGQKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDDGD 185

  Fly   304 GMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGD------------------- 349
            |...|:..:|:. |..:.|.|  |.|..|....|......|:|.|:
Zfish   186 GERKDERTDKNM-DNSEASAE--DEGISLHVDALTDHSCSVESDGEKVTCRTGDLVCDSGAEIQD 247

  Fly   350 --QKLDLDREPHNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQ- 411
              :..||..|     ..||.:|  .|..:.|:....:             |....||::....:
Zfish   248 KCEATDLGEE-----RQRGASP--KPVTSSPLTGVEA-------------PLLTHHHRENSTNKT 292

  Fly   412 ----QNQQQLQHHQMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAAC- 471
                |||                                          ..|||:||:|:.|..
Zfish   293 CLDGQNQ------------------------------------------TVKPKLWSLAEIATSD 315

  Fly   472 ----KTPP-------------------PTAAYLGQNFY 486
                ..||                   |..:.||:..|
Zfish   316 PKQQNCPPGVGLLTSSAPGASPAGAVYPATSILGRPLY 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	245..283	CDD:428673	34/37 (92%)
		IRO	455..472	CDD:214716	7/21 (33%)
irx2a	NP_957351.1	Homeobox_KN	123..161	CDD:428673	34/37 (92%)