Protein Alignment caup and Irx3

DIOPT Version :9

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: XP_006255254.1
• Gene: Irx3 / 307721
• RGDID: 1307424
• Length: 522
• Species: Rattus norvegicus
• Alignment Length: 431
• Identity: 136/431 - (31%)
• Similarity: 183/431 - (42%)
• Gaps: 132/431 - (30%)

  Fly   128 YDPAR---LAIGGYSRMALPSGGVGVG----------------VYGGPY---------------- 157
            |.|.|   ...||....|....|.|.|                |||.||
  Rat    15 YPPERPPAAGGGGGGSSAGGRSGPGAGASELAASGSLSNVLSSVYGAPYAAAAAAAAAAQGYGAF 79

  Fly   158 -PSNEQNP-YPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTLAAYGY 220
             |...:.| :|.:|..           |.:|| ||..:..|..:|.......:|.|    ..|.:
  Rat    80 LPYATELPIFPQLGAQ-----------YELKD-SPGVQHPATAAAFPHPHPAFYPY----GQYQF 128

  Fly   221 GPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 285
            |.    .:|.||||||||:||||||:||:||||||||||||||||||||||||||||||||||||
  Rat   129 GD----PSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 189

  Fly   286 KENKMTWEPKNKTEDDDD--GMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSG 348
            |||||||.|:::|:::.:  |...::|.|::..:.||...|       :.:.||...|::....|
  Rat   190 KENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEEGKRELE-------MEEEELAGEEEDTGGEG 247

  Fly   349 ------DQKLDLDREPHNL--------VAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQ 399
                  |:::||:    ||        :.:.|.|......|..|:....:|.:...:......|.
  Rat   248 LADDDEDEEIDLE----NLDSAAAGSELTLAGTAHRNGDFGLGPISDCKNSDSDDSSESLEERPL 308

  Fly   400 QMQHHQQQQQQQQNQQQLQHHQMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGI------PVPAS 458
            .:               |.......|...             |..:|.|...|:      |.|:|
  Rat   309 SV---------------LSLAPAPPPVAR-------------APASPPSPPSGLDPCAPAPAPSS 345

  Fly   459 ---KPKIWSVADTAAC-----KTPPPTAAYLGQNFYPPSSA 491
               ||||||:|:||..     ::||      |....||.:|
  Rat   346 TLQKPKIWSLAETATSPDNPRRSPP------GAGGSPPGAA 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	244..283	CDD:283551	36/38 (95%)
		IRO	455..472	CDD:214716	11/24 (46%)
Irx3	XP_006255254.1	Homeobox_KN	148..187	CDD:283551	36/38 (95%)
		IRO	345..362	CDD:214716	10/16 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D351833at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.010