Protein Alignment caup and Pknox1

DIOPT Version :10

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_057879.2
• Gene: Pknox1 / 18771
• MGIID: 1201409
• Length: 436
• Species: Mus musculus
• Alignment Length: 272
• Identity: 63/272 - (23%)
• Similarity: 103/272 - (37%)
• Gaps: 90/272 - (33%)

  Fly   151 GVYGGPYPSNEQNPYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTL 215
            |..|.||     :|..|..: .||....|| |.||...:.:.:....|.|::...|   .|.|..
Mouse   162 GEPGSPY-----SPVQSQQI-QSAITGTLS-PQGIVVPASALQQGNVTMATVAGGT---VYQPVT 216

  Fly   216 AAYGYGP----------------------NYDLAA----------RRKNATRESTATLKAWLSEH 248
            .....|.                      |.||:.          :|....:.:|..:::||.:|
Mouse   217 VVTPQGQVVTQALSPGTIRIQNSQLQLQLNQDLSILHQEDGSSKNKRGVLPKHATNVMRSWLFQH 281

  Fly   249 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK---ENKMTWEPKNKTEDDDD------- 303
            ..:||||:.||..:|..|.:||.||:.||.|||||:.:   ::..:..||.|.:...:
Mouse   282 IGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKPAQNRPVQRFW 346

  Fly   304 ------GM-----------------------MSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGK 339
                  |:                       |:.|..:..:.||..|:.:      |::.:  |:
Mouse   347 PDSLASGVAQATPSELAMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQ------QVMMA--GQ 403

  Fly   340 AEKE-VDSSGDQ 350
            :|.| |||:.|:
Mouse   404 SEDESVDSTEDE 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	245..283	CDD:428673	19/37 (51%)
		IRO	455..472	CDD:214716
Pknox1	NP_057879.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	23..50
		Meis_PKNOX_N	80..165	CDD:465140	1/2 (50%)
		Homeobox_KN	278..316	CDD:428673	19/37 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	401..436		7/17 (41%)