DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment caup and meis1a

DIOPT Version :9

Sequence 1:	NP_524046.2	Gene:	caup / 39440	FlyBaseID:	FBgn0015919	Length:	693	Species:	Drosophila melanogaster
Sequence 2:	NP_571972.2	Gene:	meis1a / 170455	ZFINID:	ZDB-GENE-020122-3	Length:	380	Species:	Danio rerio

Alignment Length:	157	Identity:	39/157 - (24%)
Similarity:	71/157 - (45%)	Gaps:	28/157 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   212 DPTLAAYGYGPNYDLAARRKNATRE------STATLKAWLSEHKKNPYPTKGEKIMLAIITKMTL 270
            |.::|:...|...|....|||..:.      :|..::|||.:|..:|||::.:|..|:..|.:|:
Zfish   241 DQSVASPSTGEEEDPDKERKNNKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKRQLSQDTGLTI 305

  Fly   271 TQVSTWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLI-- 333
            .||:.||.|||||:.:.                 |:  |:..:..|..|..:.:|...|..::
Zfish   306 LQVNNWFINARRRIVQP-----------------MI--DQSNRAVGHSGPYTPDAQPMGGFVMDG 351

  Fly   334 KSELG-KAEKEVDSSGDQKLDLDREPH 359
            :|.:| :....:...|...:.|:.:.|
Zfish   352 QSHMGIRPPAALGGLGGVNMGLESQWH 378

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	244..283	CDD:283551	17/38 (45%)
caup	NP_524046.2	IRO	455..472	CDD:214716
meis1a	NP_571972.2	Meis_PKNOX_N	99..182	CDD:293102
meis1a	NP_571972.2	Homeobox_KN	279..318	CDD:283551	17/38 (45%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900