Protein Alignment caup and pknox1.2

DIOPT Version :10

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: XP_707868.2
• Gene: pknox1.2 / 170445
• ZFINID: ZDB-GENE-020123-1
• Length: 445
• Species: Danio rerio
• Alignment Length: 276
• Identity: 66/276 - (23%)
• Similarity: 105/276 - (38%)
• Gaps: 74/276 - (26%)

  Fly   154 GGPY---PSNEQNPYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASL---QSTTGYYSYD 212
            |.||   |:..|||:..           ..:|.||...:.:.:....|..::   |..||...|.
Zfish   176 GSPYSPSPTQPQNPFTG-----------AMSPQGIVVPASALQQGNVTVTAVNPTQMVTGGTVYQ 229

  Fly   213 PTLAAYGYGP----------------------NYDLA----------ARRKNATRESTATLKAWL 245
            |.......|.                      |.||:          |:|....:.:|..:::||
Zfish   230 PVTVVTPQGQVVTQTLSPGTVRIQNSQLQLQLNQDLSFFSQEDGSSKAKRGILPKHATNVMRSWL 294

  Fly   246 SEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR-----LKKENKMTWEPKNKTED----- 300
            .:|..:||||:.||..:|:.|.:||.||:.||.|||||     |...:..|.:.|.||..
Zfish   295 FQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRILQPMLDASSSDTPKSKKKTPQTRPLQ 359

  Fly   301 ---DDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSE----------LGKAEKEVDSSGDQKL 352
               .:....|..:::....||..::....:.|.|.:.|:          :| ...|.|...|.:.
Zfish   360 RFWPNSLASSVSQQQVTMEDGTTVTVGVGEDGLQTLSSDGATLAMQQVMMG-GHSEDDDDEDDEE 423

  Fly   353 DLDREP-HNLVAMRGL 367
            |.|.:| |:.::..||
Zfish   424 DEDTDPSHSDMSRLGL 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	245..283	CDD:428673	19/37 (51%)
		IRO	455..472	CDD:214716
pknox1.2	XP_707868.2	Meis_PKNOX_N	91..176	CDD:465140	66/276 (24%)
		Homeobox_KN	294..332	CDD:428673	19/37 (51%)