Protein Alignment caup and Irx3

DIOPT Version :9

• Sequence 1: NP_524046.2
• Gene: caup / 39440
• FlyBaseID: FBgn0015919
• Length: 693
• Species: Drosophila melanogaster
• Sequence 2: NP_001240751.1
• Gene: Irx3 / 16373
• MGIID: 1197522
• Length: 522
• Species: Mus musculus
• Alignment Length: 425
• Identity: 135/425 - (31%)
• Similarity: 182/425 - (42%)
• Gaps: 120/425 - (28%)

  Fly   128 YDPARLAI---GGYSRMALPSGGVGVG----------------VYGGPY---------------- 157
            |.|.|...   ||....|....|.|.|                |||.||
Mouse    15 YPPERPGAAGGGGGGSSAGGRSGPGAGASELAASGSLSNVLSSVYGAPYAAAAAAAAAAQGYGAF 79

  Fly   158 -PSNEQNP-YPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTLAAYGY 220
             |...:.| :|.:|..           |.:|| ||..:..|..:|.......:|.|    ..|.:
Mouse    80 LPYATELPIFPQLGAQ-----------YELKD-SPGVQHPATAAAFPHPHPAFYPY----GQYQF 128

  Fly   221 GPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 285
            |.    .:|.||||||||:||||||:||:||||||||||||||||||||||||||||||||||||
Mouse   129 GD----PSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK 189

  Fly   286 KENKMTWEPKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSG-- 348
            |||||||.|:::|:::.:...|:.|:|.:..|..:...|.     ::.:.||...|::....|
Mouse   190 KENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEESKREL-----EMEEEELAGEEEDTGGEGLA 249

  Fly   349 ----DQKLDLDREPHNL--------VAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQM 401
                |:::||:    ||        :.:.|.|......|..|:....:|.:...:......|
Mouse   250 DDDEDEEIDLE----NLDSAAAGSELTLAGAAHRNGDFGLGPISDCKTSDSDDSSEGLEDRP--- 307

  Fly   402 QHHQQQQQQQQNQQQLQHHQMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPA-----SKPK 461
                           |....:..|   |....:..:   :....|.|.|...|.||     .|||
Mouse   308 ---------------LSVLSLAPP---PPPVARAPA---SPPSPPSSLDPCAPAPAPSSALQKPK 351

  Fly   462 IWSVADTAAC-----KTPPPTAAYLGQNFYPPSSA 491
            |||:|:||..     ::||      |....||.:|
Mouse   352 IWSLAETATSPDNPRRSPP------GAGGSPPGAA 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
caup	NP_524046.2	Homeobox_KN	244..283	CDD:283551	36/38 (95%)
		IRO	455..472	CDD:214716	11/26 (42%)
Irx3	NP_001240751.1	Homeobox_KN	148..187	CDD:283551	36/38 (95%)
		IRO	345..362	CDD:214716	9/16 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0773
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	181	1.000	Inparanoid score	I3968
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11211
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	5	5.010