DRSC/TRiP Functional Genomics Resources

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Protein Alignment caup and LOC1270088

DIOPT Version :10

Sequence 1:NP_524046.2 Gene:caup / 39440 FlyBaseID:FBgn0015919 Length:693 Species:Drosophila melanogaster
Sequence 2:XP_061498467.1 Gene:LOC1270088 / 1270088 VectorBaseID:AGAMI1_009170 Length:503 Species:Anopheles gambiae


Alignment Length:457 Identity:90/457 - (19%)
Similarity:156/457 - (34%) Gaps:136/457 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 RRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 293
            ||.|..::|...||.||.||:.|.|||..||:.|:....:|:.||..||.|||||:..|      
Mosquito   100 RRGNLPKQSVKILKRWLYEHRFNAYPTDAEKLTLSQEANLTVLQVCNWFINARRRILPE------ 158

  Fly   294 PKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQKLDLDREP 358
                                      .:..:..||.:..| |..||           ||.     
Mosquito   159 --------------------------MIRRDGHDPMHYTI-SRRGK-----------KLS----- 180

  Fly   359 HNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQN---------- 413
            ..:|.:.|:.|.|..|.:..:..|.....:.........||.:..|.||..|..:          
Mosquito   181 GQMVGLDGMNPLAMSPASEVIVGATEEIIEEEEVIEDGVPQIITSHGQQYVQTPSGLVKVEEDVD 245

  Fly   414 -QQQLQHHQMDQPYYHPGGYGQE-----ESGE------FAAQKNPLSRDCGIPVPASKPKIWSVA 466
             :..:.:...|....:.....:|     |.||      :|.:|     |..||...::.::    
Mosquito   246 FEDHIIYRSDDSNIEYEYAQSEEEIPVTEQGEWDGMIRYANEK-----DDEIPEEITEEEV---- 301

  Fly   467 DTAACKTPPPTAAYLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSME 531
                      .|:..|:|.:..::....|.:.||||.......:               |..:| 
Mosquito   302 ----------IASDGGENEFFTTTTHTNLANIPLQQSSTNVSVR---------------PTVTM- 340

  Fly   532 LGSPLSMMSSYAGGSPYSRIPTAYTEAMGMHLPSSSSSSSSTGKLP--------PTH--IHPAPQ 586
              :...::::..||  ..|:....:.|....:.:|...|::.|.|.        |..  :...|:
Mosquito   341 --TAAKIITTTPGG--VQRVIIGQSNAGSNAISTSQGGSTTLGTLKLGGNLTAVPLQGGLKVGPK 401

  Fly   587 RVGFPEIQPDTPPQT--------PPTMKLNSSGGSSSSSG--------SSHSSSMHSVTPVTVAS 635
            ::........|...|        ..|:.|..||.:::::|        :|.:::.|:.|.|.|..
Mosquito   402 KLTVVTSSGKTATVTATSLGDSNTKTITLVQSGSNNNNAGNANNNNNNNSQNTNAHTTTAVKVKG 466

  Fly   636 MV 637
            ::
Mosquito   467 VI 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caupNP_524046.2 Homeobox_KN 245..283 CDD:428673 18/37 (49%)
IRO 455..472 CDD:214716 0/16 (0%)
LOC1270088XP_061498467.1 None

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