DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and KNAT2

DIOPT Version :10

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001320784.1 Gene:KNAT2 / 843388 AraportID:AT1G70510 Length:314 Species:Arabidopsis thaliana


Alignment Length:410 Identity:80/410 - (19%)
Similarity:140/410 - (34%) Gaps:130/410 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VDFFHRYKE----DI----QLMKNLNTDAFRLSIAWSRIFP-------------HGRKEKGVSQA 133
            |.|...::|    |:    :|::...|:.|  |.|::..||             |.|.||..|:.
plant   120 VSFGQNFRECDFIDMDRLEELVQESETNVF--SFAFTDFFPTGLGWLVDRISGQHSRIEKAFSKL 182

  Fly   134 GVKFYHDLIDELLKNG--------IIPFVTVFHWDTPQDLEDEYGGF--LSENIVKDFREYADYV 188
             .||:..:|||.||.|        :...:.:.:..|      |||.|  .|::::   ....|.|
plant   183 -TKFFQHVIDEELKIGQSQDHSNLVSSMLDMINRST------EYGSFKITSDHLI---AMMTDIV 237

  Fly   189 FTEYGGKVKNWITFNEPWVFAHAGYDVGKKAPGRCSRYLKGCEDRDGRSGYEAYLVSHNLLNAHA 253
            .   ||.....||.  .|....                                      |..|.
plant   238 L---GGVNAGTITM--IWTMTE--------------------------------------LTRHP 259

  Fly   254 EAVEVFRQKVKGGKIGIAHSPAWFEPHDLK----DSNDVPTVSRVLDFMLGWHLDPTTFGDYPQI 314
            ..::..|::::          |...|:..:    |...|..:..|:......| .|..|....|:
plant   260 RVMKKLREEIR----------ATLGPNKERITEEDLEKVEYLKLVIKETFRLH-PPGPFLLPRQV 313

  Fly   315 MKD--LLGHRLPKFTSSQKAKLKDSTDFVGLNYYTSTFSNHNEKPDPSTPSWKQDSLVAWEPKNV 377
            |.|  :.|:.:||     .|.:|.||..:|.:  ...::|    |:...|....::.:.::.::.
plant   314 MSDIEIQGYHIPK-----NAHIKISTYAIGRD--PKCWTN----PEEFNPERFANTSINYKGQHY 367

  Fly   378 DHSAIG----SQP-LTAALPVYAKGFRSLLKYIKDKYANPEIMIMENGYGDKLKDKDSVEVGTAD 437
            :....|    |.| :|..:.:...|..::|.|......|          |..:||.|..|.|...
plant   368 ELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPN----------GMTIKDIDMEEDGALT 422

  Fly   438 YNRKYYLQRHLLAMNEAICI 457
            ..:|..|:. :..:..::||
plant   423 IAKKVPLEL-IPTLPASLCI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 COG5576 <237..>318 CDD:227863 14/86 (16%)
Homeobox_KN 274..312 CDD:428673 8/41 (20%)
KNAT2NP_001320784.1 KNOX1 68..107 CDD:461051
KNOX2 121..172 CDD:427506 10/52 (19%)
ELK 212..233 CDD:427504 6/29 (21%)
Homeobox_KN 253..291 CDD:428673 7/85 (8%)
Blue background indicates that the domain is not in the aligned region.

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