DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and KNAT1

DIOPT Version :10

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_192555.1 Gene:KNAT1 / 826364 AraportID:AT4G08150 Length:398 Species:Arabidopsis thaliana


Alignment Length:151 Identity:42/151 - (27%)
Similarity:61/151 - (40%) Gaps:33/151 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 LSNPYGLKDT-GAGPEMGAWTSAGLQPTTGYYSYDP-----------MSAYGGLLVSNSSYGASY 253
            |:||.|..|. |:..|.....|.|   .|.....||           :..|.|.|.|     ...
plant   241 LNNPDGKSDNMGSSDEEQENNSGG---ETELPEIDPRAEDRELKNHLLKKYSGYLSS-----LKQ 297

  Fly   254 DLAARRKNA--TRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE 316
            :|:.::|..  .:|:...|..|...|.|.|||::.||:.||..|.:...|::.||.|.|:|    
plant   298 ELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKR---- 358

  Fly   317 NKMTWEPKNRTDDDDDALVSD 337
               .|:|    .:|...:|.|
plant   359 ---HWKP----SEDMQFMVMD 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 COG5576 <237..>318 CDD:227863 25/82 (30%)
Homeobox_KN 274..312 CDD:428673 15/37 (41%)
KNAT1NP_192555.1 KNOX1 133..172 CDD:461051
KNOX2 189..234 CDD:427506
ELK 279..300 CDD:427504 4/25 (16%)
Homeobox_KN 320..358 CDD:428673 15/37 (41%)
Blue background indicates that the domain is not in the aligned region.

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