DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and Irx6

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_071873.2 Gene:Irx6 / 64379 MGIID:1927642 Length:439 Species:Mus musculus


Alignment Length:479 Identity:155/479 - (32%)
Similarity:201/479 - (41%) Gaps:149/479 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 AGGGGSCCENG-RP---IMTDPVSGQTVCSCQYDSARLALSSYSRLPAASVGVYGTPYPSTDQNP 186
            |....:|||.. ||   :.:...|..|:|...||| ||..|:...|.|| :|:||.||.:....|
Mouse    20 ASSSATCCETAPRPVSDVASASTSASTLCCTPYDS-RLLGSARPELGAA-LGIYGAPYAAAQSYP 82

  Fly   187 -YQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAG----LQPTTGYYSYDPMSAYGGLLVSN 246
             |.:.|.:.......|:..|..|| .||....:.|..|    .:.|.|.|.||   .|||:.:|:
Mouse    83 GYLTYGPEPPTLCGALNPQYEFKD-AAGSFAPSLTQPGAYYPYETTLGQYQYD---RYGGVELSS 143

  Fly   247 SSYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 311
                     |.||||||||||:.|||||:||:|||||||||||||||||||||||||||||||||
Mouse   144 ---------AGRRKNATRESTSALKAWLHEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR 199

  Fly   312 RLKKENKMTWEPKN------RTDDDDDAL--VSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDA 368
            ||||||||||.|||      :.|..:|:|  ::.|.||....:.::|.:.|.....:|.:|||:|
Mouse   200 RLKKENKMTWAPKNKGGEERKADSGEDSLGCLNGDTKDATASQEARGLRLSDLEDLEEEEEEEEA 264

  Fly   369 IDE--------------------------DQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSG 407
            .:|                          .::||...   ..|.|.|..........|.....:.
Mouse   265 EEEAAVSAARRLADFQKSTQPLPAPCAAAQERCLESR---ECGLGLPRFSFTEAPQSGEADFITA 326

  Fly   408 HPGGYHPYHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLAD 472
            .|||.....|     |.:|.                                    ||:|||||.
Mouse   327 EPGGPTMILH-----YPSGH------------------------------------KPRIWSLAH 350

  Fly   473 TVGC-------KTPPPAY----------------------------------MGH-----QSMPL 491
            |...       .|||.|.                                  .|:     |.:||
Mouse   351 TAAASAVESAPSTPPRAQSPECHMIPRQPSSIRRLLVPRDSEGEEDSPAAKAFGNSTFTLQGLPL 415

  Fly   492 QQQQQQQQQQQQAQHQYPP-SEAG 514
            ......::::.:.:.|||. :|||
Mouse   416 NCAPYPRRREPEVRFQYPSGAEAG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 36/38 (95%)
Irx6NP_071873.2 COG5576 <142..232 CDD:227863 68/98 (69%)
Homeobox_KN 161..200 CDD:283551 36/38 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..270 22/64 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9093
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3756
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm8793
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.860

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