DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and PKNOX2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001369252.1 Gene:PKNOX2 / 63876 HGNCID:16714 Length:472 Species:Homo sapiens


Alignment Length:289 Identity:61/289 - (21%)
Similarity:105/289 - (36%) Gaps:102/289 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMG--AWTSAGLQPTTGYYSYDP 235
            |.|....||.:.:....:....::.....:||.|:....:..:.|  |.|:...|..:|...|.|
Human   182 GPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGGALYQP 246

  Fly   236 MS-------------AYGGLLVSNSSYGASYDLAARRKNATRES-----------TATLKAWLNE 276
            ::             ..|.:.:.|:.  .:.||.:...|..::|           |..:::||.:
Human   247 VTMVTSQGQVVTQAIPQGAIQIQNTQ--VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQ 309

  Fly   277 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL---------------KKENKMTWEPKNR 326
            |..:||||:.||..:|..|.:||.||:.||.|||||:               .|:.|....|..|
Human   310 HLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQR 374

  Fly   327 -------------------TDDD----------------------------DDALVSDDEKDKED 344
                               |:.|                            ||:|...:|:|:::
Human   375 FWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQAMMAAHDDSLDGTEEEDEDE 439

  Fly   345 LEPSKGSQGSVSLAKDETKEEEDAIDEDQ 373
            :|            ::|.:|.|:.:||.|
Human   440 ME------------EEEEEELEEEVDELQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 20/38 (53%)
PKNOX2NP_001369252.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
gliding_GltG 5..>77 CDD:411344
Meis_PKNOX_N 96..181 CDD:406806
Homeobox_KN 306..345 CDD:399131 20/38 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..371 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..405 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..472 12/47 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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