DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and irx5a

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001038692.1 Gene:irx5a / 573346 ZFINID:ZDB-GENE-010716-2 Length:446 Species:Danio rerio


Alignment Length:458 Identity:146/458 - (31%)
Similarity:193/458 - (42%) Gaps:135/458 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 YSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKDTGA--GPEMG--AWTSAGL 224
            |...|:||:.:|..|..||            |....|.:...|...:|:  .|..|  |:|||  
Zfish     7 YLYQPSASLALYSCPAYST------------SVISGPRTEELGRSSSGSAFAPYAGSTAFTSA-- 57

  Fly   225 QPTTGYYSYDPMSAYGGLLVSNSSYGAS-------------------------YDLAARRKNATR 264
              :.||.|:.|.||......:.:||.:|                         |...|.||||||
Zfish    58 --SPGYNSHLPYSADAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR 120

  Fly   265 ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDD 329
            ::|||||||||||:|||||||||||||||||||||||||||||||||||||||||||.|:||::|
Zfish   121 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSED 185

  Fly   330 DDDALVSDDEKDKEDLEPSKGSQGSVSL------------------AKDETKEEE---DAIDEDQ 373
            :::....|.||:.:| ||:|.:....|.                  .||||..::   ...|.:.
Zfish   186 EEEDENIDLEKNDDD-EPNKPTDKGDSTDTEADHKLINPGEIPCDRFKDETHSKDLDPPLTDSEL 249

  Fly   374 KCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQAG-----QQGGMLP 433
            |...:...|.|....|:..|                          |:..|.|     |:....|
Zfish   250 KEAEERTDLLAEQAKPTTSS--------------------------PSVLQRGSDLITQEKPSEP 288

  Fly   434 FHGE---NSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTV----GCKTPPPAYMGHQSMPL 491
            .|..   ||.:.:.:..|.:           |.|||:||||:..    .||....|   .|:..|
Zfish   289 GHAASTGNSNVTSVIHSPPS-----------APKPKLWSLAEIATSSDRCKGSSEA---SQAAGL 339

  Fly   492 QQQQ--QQQQQQQQAQHQYP-PSEAGRDQQLFNGAAAPYLRPHTTAYGGFLGATT----QQLHTT 549
            .|..  .......::..|.| |:.....:.::      |..|.   |.|:...:|    ...|.|
Zfish   340 SQSTVIASAASPTRSSPQCPLPNNTVLSRPIY------YTSPF---YPGYTNYSTFGHLHSSHGT 395

  Fly   550 NNS 552
            |.|
Zfish   396 NTS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
irx5aNP_001038692.1 Homeobox_KN 129..168 CDD:283551 37/38 (97%)
IRO 307..324 CDD:214716 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8040
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.900

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