DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and Tgif2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001128455.1 Gene:Tgif2 / 499929 RGDID:1560115 Length:237 Species:Rattus norvegicus


Alignment Length:123 Identity:37/123 - (30%)
Similarity:58/123 - (47%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 VSNSSYGASYDLAA------RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQV 302
            :|:|..|....|.:      ||.|..:||...|:.||..|:.|.||::.||:.|:..|.:::.|:
  Rat     1 MSDSDLGEDEGLLSLTGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQI 65

  Fly   303 STWFANARRR-----LKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSV 355
            ..||.|||||     |:|:.|          |.:...:|.......|:...:||..|:
  Rat    66 CNWFINARRRLLPDMLRKDGK----------DPNQFTISRRGGKASDVALPRGSSPSL 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 16/38 (42%)
Tgif2NP_001128455.1 Homeobox_KN 36..75 CDD:399131 16/38 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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