DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and irx4b

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001018329.2 Gene:irx4b / 474318 ZFINID:ZDB-GENE-040712-4 Length:439 Species:Danio rerio


Alignment Length:501 Identity:155/501 - (30%)
Similarity:205/501 - (40%) Gaps:187/501 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AYTQFGYGGFPSASQLLPPSVQTTEDASANVNVNVNEALVMTNAPAMSPTGGQDCQGSQPSGGAG 67
            ::||||| .:|:|.|||                                                
Zfish     2 SFTQFGY-SYPAAPQLL------------------------------------------------ 17

  Fly    68 GDASSGALSPNALSQNSNAATVVGAGGGSSAGGGGPADLATGGSLDGNGVGTTPTAGGAGGGGSC 132
                   :|.||||                      ....:.|||..:||.|:|           
Zfish    18 -------MSSNALS----------------------TCFESSGSLLDSGVPTSP----------- 42

  Fly   133 CENGRPIMTDPVSGQTVCSCQ-YDSARLALSSYSRLPAASVGVYGTPYPSTDQN-PYQS---IGV 192
                          |....|. |:|..:|.|.:..:|.|   |||.   |..:| .|.|   .|.
Zfish    43 --------------QNSLYCPVYESRLVASSRHELIPTA---VYGN---SCSKNHVYDSCSTYGP 87

  Fly   193 DSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYD-PMSAYGGLLVSNSSYG-ASYDL 255
            ||:|.|     |.|..:...|.:.|   .:.:..::.||.|| |:..|     |...|| .|.|:
Zfish    88 DSAACY-----PLGKLNEKDGVQTG---HSRVTQSSAYYPYDYPIGQY-----SYDRYGYGSVDV 139

  Fly   256 AARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 320
            ..||||||||:|:||||||.|||||||||||||||||||||||||||||||||||||||||||||
Zfish   140 GTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 204

  Fly   321 WEPKNRTDDDDDALVSDDEKDKEDL--EPSKGSQG-SVSLAKDETK------EEEDAIDEDQKCL 376
            |.|:|:..|:.:.  .||::|.::.  ||.|..|. :.:..||:|.      ::.|.::.|    
Zfish   205 WSPRNKNSDEKEC--DDDQEDLDEAQEEPIKTEQDFNDNHGKDDTDQLHSDLDDFDLVESD---- 263

  Fly   377 GQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPG---------GYHPYHHQHPAYYQAGQQ--GG 430
                                     |......|.         ..||..|...|::::..:  .|
Zfish   264 -------------------------GSECESKPSFVVHVHSETSDHPETHFKDAFHESVTELTRG 303

  Fly   431 MLPFHGENSKLQTDLGDPKNQLGR---DCGVPIPATKPKIWSLADT 473
            :..|  ...:|:....|  :|:.:   ..|.....|||||||||.|
Zfish   304 VHKF--SEDRLRAPAED--HQMAKFYLQQGQKTIETKPKIWSLAQT 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
irx4bNP_001018329.2 Homeobox_KN 157..196 CDD:283551 37/38 (97%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I9005
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134285
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm6453
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.910

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