DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and irx6a

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_005169033.1 Gene:irx6a / 474317 ZFINID:ZDB-GENE-040712-5 Length:505 Species:Danio rerio


Alignment Length:634 Identity:186/634 - (29%)
Similarity:254/634 - (40%) Gaps:201/634 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VGTTPTAGGAGGGGSCCEN-GRPIMTDPVSGQTVCS--CQYDSARLALSSYSRLPAASVGVYGTP 178
            |..||:.       :||:: .|.:.....:.||..|  |.....||..|:.:.|.|| :|:||:|
Zfish    25 VSATPST-------TCCDSISRSVTEGSSASQTAASFCCPSYENRLLASTRTELNAA-LGMYGSP 81

  Fly   179 Y----PSTDQN-----PYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYD 234
            |    .:..||     ||.:   |.||.||.|:..|.:|:..     |:..|...||.| ||.||
Zfish    82 YAAAAAAAGQNYANYFPYSA---DPSAIYSSLNPQYEIKEGS-----GSLHSTITQPAT-YYPYD 137

  Fly   235 -PMSAYGGLLVSNSSYG-ASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKM 297
             .:..|     ....|| ..::.:.||||||||:|:|||.||.||:|||||||||||||||||||
Zfish   138 HSLGQY-----QYDRYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKM 197

  Fly   298 TLTQVSTWFANARRRLKKENKMTWEPKNRTDDD--------DDALVSD--DEKDKEDLEPSKGSQ 352
            ||||||||||||||||||||||||.|||:..||        |..:..|  |.||::||:.|.   
Zfish   198 TLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKEDLGKSDPDITKDSKDSKDEQDLQFSD--- 259

  Fly   353 GSVSLAKDETKEEE-DAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYH 416
                  .|:.::|: |.:|.|.:..||.::       |::                         
Zfish   260 ------LDDMEDEDCDKLDSDCEKSGQDDL-------PTS------------------------- 286

  Fly   417 HQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCG--VPIPATKPKIWSLADTVGCKTP 479
                                         ..||    |||.  :|:.:..|.......::|...|
Zfish   287 -----------------------------SPPK----RDCNPDIPLHSNFPSFPCGLKSLGPLNP 318

  Fly   480 PPAYMGHQSMPLQQQQQQQQQ---QQQAQHQYPPSEAGRDQQLFNGAAAPYLRPHTTAYGGFLGA 541
            .  |:.|.....||||...|.   ...|...:..||..|...|...|||          |..|| 
Zfish   319 D--YLDHLGSKPQQQQPSPQSTSINTVALSHFESSEKPRIWSLARTAAA----------GVVLG- 370

  Fly   542 TTQQLHTTNNSIPYSNMPPQQQQP---QQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHPQQQQQ 603
             ||.:......            |   |.|..:|...|.:. .|...|...|....|.....|:.
Zfish   371 -TQHVGDVRTG------------PVDCQMQGVRLPTVGAVQ-CGELKGLQDPTNLSNTESLFQEG 421

  Fly   604 LQ--QQSQSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSLLPTATQVPMTATCRSSNAFGFPA 666
            ||  .::.|:.|                    .|.|.     |.:::...:|.:|:.|:..|||:
Zfish   422 LQGIHKAYSSGS--------------------FKTLQ-----LHSSSYPGLTESCQYSSMEGFPS 461

  Fly   667 SGYPMNFSARLGEYSPRDDYSSGNSSSSSSSSPQLQR-NEAMFKPLFKK 714
            :|                 .:...||..|.:.|.:|. ....|:|:.|:
Zfish   462 AG-----------------KTETESSELSDTCPTIQEAKTTAFRPVMKR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 36/38 (95%)
irx6aXP_005169033.1 Homeobox_KN 173..212 CDD:283551 36/38 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm6453
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.910

Return to query results.
Submit another query.