Protein Alignment ara and hth

DIOPT Version :10

• Sequence 1: NP_524045.2
• Gene: ara / 39439
• FlyBaseID: FBgn0015904
• Length: 717
• Species: Drosophila melanogaster
• Sequence 2: NP_476576.1
• Gene: hth / 41273
• FlyBaseID: FBgn0001235
• Length: 487
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 78/352 - (22%)
• Similarity: 116/352 - (32%)
• Gaps: 95/352 - (26%)

  Fly   100 GGGPADLATGGSLDGNGVGTTPTAGGAGGGGSCCENGRPIMTDPVSGQTVCSCQYDSARLALSSY 164
            |..|.||.    :|.......|..|.|.|.|    ......|....|.:....:..|:.|:....
  Fly   198 GKMPIDLV----IDERDTTKPPELGSANGEG----RSNADSTSHTDGASTPDVRPPSSSLSYGGA 254

  Fly   165 SRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSPL----------------SNPYGLKDTGAG 213
            ....|.|.|...||.|.:.|.|..........|.|.|                |:|...::..|.
  Fly   255 MNDDARSPGAGSTPGPLSQQPPALDTSDPDGKFLSSLNPSELTYDGRWCRREWSSPADARNADAS 319

  Fly   214 PEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNSSYGASY------DLAARRKNATRE------S 266
            ..:.:....|.....|      .||.|.  .||:|.|:..      |.|:.:||..:.      :
  Fly   320 RRLYSSVFLGSPDNFG------TSASGD--ASNASIGSGEGTGEEDDDASGKKNQKKRGIFPKVA 376

  Fly   267 TATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDD 331
            |..|:|||.:|..:|||::.:|..||..|.:|:.||:.||.|||||:
  Fly   377 TNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRI------------------ 423

  Fly   332 DALVSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSG 396
                         ::|                    .||:..:.:...:...:|:|:.:.|....
  Fly   424 -------------VQP--------------------MIDQSNRAVYTPHPGPSGYGHDAMGYMMD 455

  Fly   397 GYPGGGGSSSGHPGGYHPYHHQHPAYY 423
            ..........|.||.:..|.|..||.|
  Fly   456 SQAHMMHRPPGDPGFHQGYPHYPPAEY 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ara	NP_524045.2	COG5576	<237..>318	CDD:227863	34/92 (37%)
		Homeobox_KN	274..312	CDD:428673	17/37 (46%)
hth	NP_476576.1	Meis_PKNOX_N	127..211	CDD:465140	5/16 (31%)
		Homeobox_KN	384..422	CDD:428673	17/37 (46%)