DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and irx3

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001001216.1 Gene:irx3 / 407888 XenbaseID:XB-GENE-480486 Length:448 Species:Xenopus tropicalis


Alignment Length:478 Identity:153/478 - (32%)
Similarity:197/478 - (41%) Gaps:141/478 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 LSSYSRLPAASVGVYGTPYPSTDQN-------PYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGA 218
            ||....|......||||||.:....       ||.:    ....:..|.:.|.:||:     .|.
 Frog    31 LSPAGTLSNVLSSVYGTPYAAAAAAQAYGAFLPYSA----ELPIFPQLGSQYEMKDS-----PGV 86

  Fly   219 WTSAGLQPTTGYYSY------DPMSAYGGLLVSNSSYGASYDLAARRKNATRESTATLKAWLNEH 277
            ..:|...|...:|.|      ||                     :|.||||||||:|||||||||
 Frog    87 QHAAFSHPHAAFYPYGQYQFGDP---------------------SRPKNATRESTSTLKAWLNEH 130

  Fly   278 KKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDK 342
            :|||||||||||||||||||||||||||||||||||||||||||.|::|||::.:|..||.|:||
 Frog   131 RKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSDHEEDK 195

  Fly   343 E------DLEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGG 401
            .      |||       ::.....|:||:.|..|.|.....:.:                     
 Frog   196 HEDDEEIDLE-------NIDTEDIESKEDLDDPDTDIHSDSKTD--------------------- 232

  Fly   402 GGSSSGHPGGYHPYHHQHPAYYQA--GQQGGMLPFHGENSKLQTD--LGDP---KNQLGRDCGVP 459
            ..|.|....|:...:.......::  ||:..:.....:...|.:|  ...|   :.:|.|....|
 Frog   233 ARSDSEASDGFEDLNAPEDRLLKSVVGQRQVLNEEPQDKCALSSDAKASQPACEQIKLDRIPSSP 297

  Fly   460 -----IPAT-KPKIWSLADTVGCKTPP---PAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGR 515
                 |||. ||||||||:|......|   |...|          ....|...|||:...|...|
 Frog   298 PLENNIPAAHKPKIWSLAETATTPDNPRRSPNTGG----------SVNTQNLIAQHRLIASPGSR 352

  Fly   516 ----------DQQLFNGAAAPYLR----PHTTAYGGFLGATT-------QQLHTTNN-------- 551
                      .|||....:|.:|:    .||.     ||:.|       :..|:|::        
 Frog   353 FQGWTGRAFSAQQLSLLNSAHFLQGLSVSHTA-----LGSGTASFPKAAEPKHSTDSLTDRSSTV 412

  Fly   552 ----SIPYSNMPPQQQQPQQQQQ 570
                .||..|...|..|.:.|.|
 Frog   413 DIEKKIPVLNTAFQPVQRRSQNQ 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
irx3NP_001001216.1 Homeobox_KN 126..165 CDD:310480 37/38 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..250 26/106 (25%)
IRO 304..321 CDD:214716 11/16 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..410 3/22 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7951
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 165 1.000 Inparanoid score I4061
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.100

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