DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and irx1a

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_997067.1 Gene:irx1a / 403019 ZFINID:ZDB-GENE-040707-1 Length:426 Species:Danio rerio


Alignment Length:548 Identity:166/548 - (30%)
Similarity:225/548 - (41%) Gaps:157/548 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 GGSLDGNGVGTTPT--AGGAGGGGSCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRLPAAS 171
            ||  |..|| .||:  ||.|..|||.                      .:|..|:||.       
Zfish    20 GG--DRPGV-LTPSSRAGSAEIGGSA----------------------SAAAAAMSSV------- 52

  Fly   172 VGVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKDT-GAGP-EMGAWTSAGLQPTTGYYSY- 233
            :|:|...:..:...||.|..:   |.:|.:.:.|.|||: |..| ...|.||....| .|.:.| 
Zfish    53 LGMYPYAHNYSAFLPYTSADL---ALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYP-YGQFQYG 113

  Fly   234 DPMSAYGGLLVSNSSYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 298
            ||                     ||.||||||||:|||||||||:||||||||||||||||||||
Zfish   114 DP---------------------ARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMT 157

  Fly   299 LTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKE--------DLEPSKGSQGSV 355
            ||||||||||||||||||||:||..  |:.||::...||:|.|.|        |||       |:
Zfish   158 LTQVSTWFANARRRLKKENKVTWGA--RSKDDENIFGSDNEGDAEKNEDEEEIDLE-------SI 213

  Fly   356 SLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHP 420
            .:.|.:..:.:.:.:||:....:...|                                      
Zfish   214 DIDKIDDNDGDQSNEEDEDKRAELESL-------------------------------------- 240

  Fly   421 AYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIP-ATKPKIWSLADTVGCKTPPPAYM 484
               |..:.....|..|.|:  .|.:..|    ||..|..:| :.||||||||:|.          
Zfish   241 ---QEKRHASKEPSDGNNN--TTRVLSP----GRQGGFQVPVSNKPKIWSLAETA---------- 286

  Fly   485 GHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAAPYLRPHTTAYGGFLGATTQQLHTT 549
               :.|...|:........:...:.||..     |:......:   |....|.|||..:.....:
Zfish   287 ---TSPDSAQKPTSPSVPVSHPAFLPSHG-----LYTCQIGKF---HNWTNGAFLGQNSLLNVRS 340

  Fly   550 NNSIPYSNMPPQQQQPQQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHPQQQQQLQQQSQSTASQ 614
            ...:...|.|.||||.|.....||    :.:.|::..  :|.....:|..::..|:.:|.:...:
Zfish   341 FLGVNQHNHPAQQQQQQTGPASLQ----VLSAGNTDK--MPEDLSPKHIDRENVLRNESPTQPLK 399

  Fly   615 RAMGFLEAQPDTPPQTPPNMKVLSGALS 642
            .:...|...|..  |.....:||: |||
Zfish   400 SSFRPLHDSPRN--QQESTQRVLT-ALS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
irx1aNP_997067.1 Homeobox_KN 132..171 CDD:283551 37/38 (97%)
IRO <276..289 CDD:214716 9/25 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8040
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4341
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.100

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