DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and irx4a

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_021322341.1 Gene:irx4a / 402999 ZFINID:ZDB-GENE-040426-1825 Length:441 Species:Danio rerio


Alignment Length:414 Identity:146/414 - (35%)
Similarity:178/414 - (42%) Gaps:122/414 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SCCENGRPIMTDPVSGQTVCSCQ-YDSARLALSSYSRLPAASVGVYGTPYP-STDQNPYQSIGVD 193
            ||||:....:.|. |.||...|. |:|..||.:.:....||::||||:||. ......|.:.|.|
Zfish    25 SCCESSTRSIPDS-SAQTPVYCPVYESRLLATARHELSSAAALGVYGSPYTGGQGYGNYVTYGAD 88

  Fly   194 SSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDP-MSAYGGLLVSNSSYGASYDLAA 257
            :|||||  ...:..||..|.      ..||:.|...||.||| :..|     ....|| |.:...
Zfish    89 ASAFYS--LGTFDAKDGSAS------AHAGITPAAAYYPYDPTLGQY-----QYDRYG-SMEGGT 139

  Fly   258 RRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWE 322
            ||||||||:|:||||||.||:|||||||||||||||||||||||||||||||||||||||||||.
Zfish   140 RRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 204

  Fly   323 PKN------RTDDDDDA-------------LVSDDEKDK-------EDLEPSKGSQGSVSL---- 357
            |:|      :.|||:|.             ..|.|.:||       ||.:|.:.......|    
Zfish   205 PRNKGSDEKKYDDDEDGSPEEQIKSETNDDAESKDREDKDLQLSDLEDFDPLESESPECELKHRF 269

  Fly   358 ---AKDETKEEE-----DAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHP 414
               |..|||:.:     ..::|.:.||........                             .
Zfish   270 QISAHMETKDPQKLSIPGLLEEAKSCLKSPEDCEL-----------------------------E 305

  Fly   415 YHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTV----- 474
            ..|....:.|..||.     |                       ||..:||:|||||.|.     
Zfish   306 LRHSKACFQQQQQQS-----H-----------------------PILDSKPRIWSLAQTATSLNP 342

  Fly   475 ----GCKTPPPAYMGHQSMPLQQQ 494
                .|....||.......|.:||
Zfish   343 AEFPSCMLRCPASPSPAGGPDRQQ 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 36/38 (95%)
irx4aXP_021322341.1 Abdominal-A <140..245 CDD:332641 70/104 (67%)
Homeobox_KN 155..194 CDD:310480 36/38 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I9005
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm6453
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.910

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