DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and tgif1

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_012819925.1 Gene:tgif1 / 395014 XenbaseID:XB-GENE-853021 Length:322 Species:Xenopus tropicalis


Alignment Length:352 Identity:83/352 - (23%)
Similarity:120/352 - (34%) Gaps:113/352 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 DTGAGPEMG---AWTSAGLQPTTGYYSYD------PMSAYGGLLVSNSSYGASYDLAARRKNATR 264
            :.||..|.|   :| :.||.|.:|..:.|      |:.     |.|.:..|.    ..||.|..:
 Frog    40 EVGAAEEQGVMKSW-AQGLVPLSGSETEDDDGMDIPLD-----LSSTAGSGK----RRRRGNLPK 94

  Fly   265 ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDD 329
            ||...|:.||.||:.|.||::.||.:|:..|.::..||..||.||||||..:             
 Frog    95 ESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINARRRLLPD------------- 146

  Fly   330 DDDALVSDDEKDKEDLEPS-KGSQGSVSLAKDE---TKEEEDAIDEDQKCLGQANILRAGFGYPS 390
                ::..|.||......| ||::.|..:..|.   ||.....|||:            .|.:.|
 Frog   147 ----MLRKDGKDPNQFTISRKGAKISDVIQMDSPTGTKPYIPTIDEN------------SFHFTS 195

  Fly   391 AGSGSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRD 455
            :|                                ..|..|.|        |.:.|..|::.|.| 
 Frog   196 SG--------------------------------PNQSSGKL--------LASKLSPPQSLLAR- 219

  Fly   456 CGVPIPATKPKIWSLADTVGCKTPPPAYMGH-----QSMPLQQQQQQQQQQQQAQHQYPPSEAGR 515
               |.......:.||:|.       |....|     |....||.:.....:....:....|:.|:
 Frog   220 ---PSVICHTTVTSLSDA-------PFNFTHVLNAGQIPDPQQTEASNLTETSILYHEDTSKLGQ 274

  Fly   516 DQQ----LFNGAAAPYLRPHTTAYGGF 538
            :..    ||| ...|....|...:.||
 Frog   275 NTNAQSGLFN-TPPPTPPDHNQDFSGF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 18/38 (47%)
tgif1XP_012819925.1 Homeobox_KN 103..142 CDD:368670 18/38 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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