Protein Alignment ara and mirr

DIOPT Version :10

• Sequence 1: NP_524045.2
• Gene: ara / 39439
• FlyBaseID: FBgn0015904
• Length: 717
• Species: Drosophila melanogaster
• Sequence 2: NP_001261778.1
• Gene: mirr / 39441
• FlyBaseID: FBgn0014343
• Length: 682
• Species: Drosophila melanogaster
• Alignment Length: 786
• Identity: 254/786 - (32%)
• Similarity: 332/786 - (42%)
• Gaps: 250/786 - (31%)

  Fly    33 VNVNVNE---ALVM--------TNAPAMSPTGGQD----------CQGSQP--SGGAGGDASSG- 73
            :.|:.||   .|||        |::|...||....          |..:||  :.|..|...||
  Fly     1 MTVHSNETGICLVMNAVSTHLATSSPNTPPTNAPQSPPSTLPTLACPAAQPLSAPGIAGPGHSGM 65

  Fly    74 ----------ALSPNALSQNSNAATVVGA---GGGSSAGGGGPADLATGGSLDGNGVGTTPTAGG 125
                      :.||...|....|.::|||   |..|||.||.||.          |.|..|
  Fly    66 VTSTVPPGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAP----------GAGNPP---- 116

  Fly   126 AGGGGSCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRLPAASVGVYGTP---YPSTDQNPY 187
                ..||:.||.|.||||||||:||||||     :.:|.||.||.    |.|   ||.......
  Fly   117 ----NRCCDTGRTIYTDPVSGQTICSCQYD-----MLNYQRLAAAG----GVPLGVYPEGMSAYL 168

  Fly   188 QSIGVDSSAFYSPLSNPYG--LKD---TGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNS 247
            ..|..|...||   :||.|  ||:   .||.|    |....:     |:.||  :|:.|  ...:
  Fly   169 SGIAADQPPFY---ANPAGIDLKENLVAGASP----WPYPSM-----YHPYD--AAFAG--YPFN 217

  Fly   248 SYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 312
            |||...: .|||||||||:|:||||||||||||||||||||||||||||||||||||||||||||
  Fly   218 SYGMDLN-GARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 281

  Fly   313 LKKENKMTWEPKNRTDDDDDALVSDDEKDKED---LEPSKGSQGSVSLAKDETKEEEDAIDEDQK 374
            |||||||||||:||.||||..:..||:|:.||   |:......||.. .||.:....|.:.:..
  Fly   282 LKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTD-DKDRSGRLGDMMTDRP- 344

  Fly   375 CLGQANILRAGFGYPSAGSGS-------GGYPGGGGSSSGHPGGYHP---YHHQHP--------- 420
              |::|........|.:.:||       |..|.|     .|| .:||   :||..|
  Fly   345 --GESNNSEWSESRPGSPNGSPDLYDRPGSMPPG-----AHP-LFHPAALHHHFRPPAGSPPDIA 401

  Fly   421 AYYQAGQQGGMLPFH--GENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLAD---------TV 474
            ||:...||  :|..|  .:.:.|||.:|.              ..||:||||||         :.
  Fly   402 AYHHHQQQ--LLQQHQQAQQNSLQTAVGG--------------TAKPRIWSLADMASKDSKDSSS 450

  Fly   475 GCKTP----PPAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAA------PYLR 529
            |.|..    |||:.|....|.||                ||..    ::.:..||      ||:|
  Fly   451 GAKDNHPELPPAHPGFYGHPGQQ----------------PSPG----KILSPLAARIPNYSPYVR 495

  Fly   530 PHTTAYGGFLGATTQQLHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHTTGSS----SGPI-- 588
            |  ..|.||.|.....|..           |.|:..:.|:          |.|:|    :||:
  Fly   496 P--DLYRGFYGPAAAHLGA-----------PTQEFLEHQR----------TFGASLAAHNGPLGM 537

  Fly   589 IPLQFH-------NRHPQQQQQLQQQSQSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSL--- 643
            .||.:.       |.|......|.....|:..|        |...||...|:....|.::..
  Fly   538 NPLLWKAAVSGAANGHHFAPLSLTTSGGSSGGQ--------QVAPPPVASPSASSSSSSMGCDVV 594

  Fly   644 -LPTAT--------QVPMTATCRSSNAFGFPASGYPMNFSARLGEYSPRDDYSSGNSS----SSS 695
             :||::        ..|:::...:|::            |:..|:.||..:.:|.::.    |::
  Fly   595 HIPTSSGQSAAQHMMGPISSNSTASSS------------SSHSGKISPGVNVTSLSAKPXHPSAA 647

  Fly   696 SSSPQL 701
            |..|:|
  Fly   648 SPDPEL 653

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ara	NP_524045.2	COG5576	<237..>318	CDD:227863	63/80 (79%)
		Homeobox_KN	274..312	CDD:428673	37/37 (100%)
mirr	NP_001261778.1	Homeobox_KN	243..281	CDD:428673	37/37 (100%)