DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and mirr

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001261778.1 Gene:mirr / 39441 FlyBaseID:FBgn0014343 Length:682 Species:Drosophila melanogaster


Alignment Length:786 Identity:254/786 - (32%)
Similarity:332/786 - (42%) Gaps:250/786 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VNVNVNE---ALVM--------TNAPAMSPTGGQD----------CQGSQP--SGGAGGDASSG- 73
            :.|:.||   .|||        |::|...||....          |..:||  :.|..|...|| 
  Fly     1 MTVHSNETGICLVMNAVSTHLATSSPNTPPTNAPQSPPSTLPTLACPAAQPLSAPGIAGPGHSGM 65

  Fly    74 ----------ALSPNALSQNSNAATVVGA---GGGSSAGGGGPADLATGGSLDGNGVGTTPTAGG 125
                      :.||...|....|.::|||   |..|||.||.||.          |.|..|    
  Fly    66 VTSTVPPGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAP----------GAGNPP---- 116

  Fly   126 AGGGGSCCENGRPIMTDPVSGQTVCSCQYDSARLALSSYSRLPAASVGVYGTP---YPSTDQNPY 187
                ..||:.||.|.||||||||:||||||     :.:|.||.||.    |.|   ||.......
  Fly   117 ----NRCCDTGRTIYTDPVSGQTICSCQYD-----MLNYQRLAAAG----GVPLGVYPEGMSAYL 168

  Fly   188 QSIGVDSSAFYSPLSNPYG--LKD---TGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNS 247
            ..|..|...||   :||.|  ||:   .||.|    |....:     |:.||  :|:.|  ...:
  Fly   169 SGIAADQPPFY---ANPAGIDLKENLVAGASP----WPYPSM-----YHPYD--AAFAG--YPFN 217

  Fly   248 SYGASYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 312
            |||...: .|||||||||:|:||||||||||||||||||||||||||||||||||||||||||||
  Fly   218 SYGMDLN-GARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 281

  Fly   313 LKKENKMTWEPKNRTDDDDDALVSDDEKDKED---LEPSKGSQGSVSLAKDETKEEEDAIDEDQK 374
            |||||||||||:||.||||..:..||:|:.||   |:......||.. .||.:....|.:.:.. 
  Fly   282 LKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTD-DKDRSGRLGDMMTDRP- 344

  Fly   375 CLGQANILRAGFGYPSAGSGS-------GGYPGGGGSSSGHPGGYHP---YHHQHP--------- 420
              |::|........|.:.:||       |..|.|     .|| .:||   :||..|         
  Fly   345 --GESNNSEWSESRPGSPNGSPDLYDRPGSMPPG-----AHP-LFHPAALHHHFRPPAGSPPDIA 401

  Fly   421 AYYQAGQQGGMLPFH--GENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLAD---------TV 474
            ||:...||  :|..|  .:.:.|||.:|.              ..||:||||||         :.
  Fly   402 AYHHHQQQ--LLQQHQQAQQNSLQTAVGG--------------TAKPRIWSLADMASKDSKDSSS 450

  Fly   475 GCKTP----PPAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAA------PYLR 529
            |.|..    |||:.|....|.||                ||..    ::.:..||      ||:|
  Fly   451 GAKDNHPELPPAHPGFYGHPGQQ----------------PSPG----KILSPLAARIPNYSPYVR 495

  Fly   530 PHTTAYGGFLGATTQQLHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHTTGSS----SGPI-- 588
            |  ..|.||.|.....|..           |.|:..:.|:          |.|:|    :||:  
  Fly   496 P--DLYRGFYGPAAAHLGA-----------PTQEFLEHQR----------TFGASLAAHNGPLGM 537

  Fly   589 IPLQFH-------NRHPQQQQQLQQQSQSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSL--- 643
            .||.:.       |.|......|.....|:..|        |...||...|:....|.::..   
  Fly   538 NPLLWKAAVSGAANGHHFAPLSLTTSGGSSGGQ--------QVAPPPVASPSASSSSSSMGCDVV 594

  Fly   644 -LPTAT--------QVPMTATCRSSNAFGFPASGYPMNFSARLGEYSPRDDYSSGNSS----SSS 695
             :||::        ..|:::...:|::            |:..|:.||..:.:|.::.    |::
  Fly   595 HIPTSSGQSAAQHMMGPISSNSTASSS------------SSHSGKISPGVNVTSLSAKPXHPSAA 647

  Fly   696 SSSPQL 701
            |..|:|
  Fly   648 SPDPEL 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 38/38 (100%)
mirrNP_001261778.1 Homeobox_KN 242..281 CDD:283551 38/38 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468866
Domainoid 1 1.000 47 1.000 Domainoid score I4516
eggNOG 1 0.900 - - E1_KOG0773
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 188 1.000 Inparanoid score I3917
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351833at33208
OrthoFinder 1 1.000 - - FOG0001669
OrthoInspector 1 1.000 - - mtm6453
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 1 1.000 - - X1407
1110.930

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