DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and irx2a

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_957351.1 Gene:irx2a / 394032 ZFINID:ZDB-GENE-040426-1446 Length:432 Species:Danio rerio


Alignment Length:479 Identity:155/479 - (32%)
Similarity:201/479 - (41%) Gaps:125/479 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 SARLALSSYSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKD-TGAGPEMGAW 219
            |..||......|..:|.|...:|||.:     .:....::.|.|||  ||.... ||....||:.
Zfish    19 SCPLAAPRSEDLARSSSGSAFSPYPGS-----AAFTASANGFSSPL--PYSTDPATGFPSYMGSP 76

  Fly   220 TSAGLQPTTGYYSYDPMSAYGGLLVSNSSYGASYDL--AARRKNATRESTATLKAWLNEHKKNPY 282
            ..|......|..||.|   ||       |.|..|.|  .|.||||||::||||||||.||:||||
Zfish    77 YDAHTTGMAGAISYHP---YG-------SPGYPYQLNDPAYRKNATRDATATLKAWLQEHRKNPY 131

  Fly   283 PTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEP 347
            ||||:||||||||||||||||||||||||||||||||||.|:|:::|:|:   .|.:.:::|...
Zfish   132 PTKGQKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDE---DDGDGERKDERT 193

  Fly   348 SKGSQGSVSLAKDE-TKEEEDAIDEDQKCL----GQANILRAGFGYPSAGS-------------- 393
            .|....|.:.|:|| .....||: .|..|.    |:....|.|.....:|:              
Zfish   194 DKNMDNSEASAEDEGISLHVDAL-TDHSCSVESDGEKVTCRTGDLVCDSGAEIQDKCEATDLGEE 257

  Fly   394 ---GSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRD 455
               |:...|......:|.......:||:                  |||..:|.| |.:||    
Zfish   258 RQRGASPKPVTSSPLTGVEAPLLTHHHR------------------ENSTNKTCL-DGQNQ---- 299

  Fly   456 CGVPIPATKPKIWSLADTVGCKTPPPAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLF 520
                  ..|||:||||:..            .|.|.||             ..||...     |.
Zfish   300 ------TVKPKLWSLAEIA------------TSDPKQQ-------------NCPPGVG-----LL 328

  Fly   521 NGAAAPYLRPHTTAYGGFLGATT---QQLHTT----NNSIPYSNMPPQQQQPQQQQQQLQQGGTI 578
            ..:|     |..:..|....||:   :.|:.|    :|...|.|..|.|.|...:.....:|...
Zfish   329 TSSA-----PGASPAGAVYPATSILGRPLYYTSPFYSNYTNYGNFSPLQGQGILRYNSAAEGLLH 388

  Fly   579 HTTGSSSGPIIPLQFHNRHPQQQQ 602
            ..||.   |:|     ..:|.|.:
Zfish   389 KQTGE---PLI-----KTNPNQTE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 35/38 (92%)
irx2aNP_957351.1 Homeobox_KN 122..161 CDD:283551 35/38 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.870

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