DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and Irx2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001034594.1 Gene:Irx2 / 306657 RGDID:1309834 Length:474 Species:Rattus norvegicus


Alignment Length:530 Identity:164/530 - (30%)
Similarity:207/530 - (39%) Gaps:181/530 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SC-QYDSARLALSSYSRLPAASVGVYGTPYPS----TDQ------NPYQSIGVDSSA-----FYS 199
            || .|.::.||......|..::.|...:|||.    |.|      :|.| ...|::|     |.|
  Rat    19 SCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAATGFGSPLQ-YSADAAAAAAAGFPS 82

  Fly   200 PLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNSSYGASYDLAARRKNATR 264
            .:.:||....||               .||..||.|   ||     :::|....:..|.||||||
  Rat    83 YMGSPYDTHTTG---------------MTGAISYHP---YG-----SAAYPYQLNDPAYRKNATR 124

  Fly   265 ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDD 329
            ::|||||||||||:|||||||||||||||||||||||||||||||||||||||||||.|:|:::|
  Rat   125 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSED 189

  Fly   330 DDDALVSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDAID------EDQKCLGQAN--ILRAGF 386
            :|:. ..|..:.||: .|.|...|:      ||..|::.|.      .|..|..:::  .|....
  Rat   190 EDED-EGDASRSKEE-NPDKAQDGT------ETSAEDEGISLHVDSLTDHSCSAESDGEKLPCRA 246

  Fly   387 GYPSAGSGS---------------------GGYPGGGGSSSGHPGGYHPYHHQHPAYYQAGQQGG 430
            |.|...|||                     ...|....:||...|...|.....|.....|..||
  Rat   247 GDPLCESGSECKDKFEDLEDEEDDEDECERDLVPPKPVTSSPLTGVEAPLLSPAPEAAPRGGSGG 311

  Fly   431 MLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTV-----------GCKTP----- 479
            ..|.....|.                |.|.||:|||:||||:..           ||..|     
  Rat   312 KTPLGSRTSP----------------GAPPPASKPKLWSLAEIATSDLKQPSLGPGCGPPGLPAA 360

  Fly   480 --------PPAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAAPYLRPHTTAYG 536
                    ||....:.:.||           ..:|.|..|              |:...:|. ||
  Rat   361 AAPASSGAPPGGSPYSASPL-----------LGRHLYYTS--------------PFYGNYTN-YG 399

  Fly   537 GFLGATTQQ---LHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHT----------TGSSSGPI 588
            ....|...|   .:.|..|.|                    |.|:|.          .||.|   
  Rat   400 NLNAALQGQGLLRYNTAASSP--------------------GETLHAIPKAASDAGKAGSHS--- 441

  Fly   589 IPLQFHNRHP 598
              |:.|.|.|
  Rat   442 --LESHYRPP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
Irx2NP_001034594.1 COG5576 <115..217 CDD:227863 73/109 (67%)
Homeobox_KN 133..172 CDD:283551 37/38 (97%)
IRO 325..342 CDD:214716 9/16 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7886
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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