DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and meis2b

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_570985.1 Gene:meis2b / 30066 ZFINID:ZDB-GENE-000210-23 Length:393 Species:Danio rerio


Alignment Length:303 Identity:75/303 - (24%)
Similarity:102/303 - (33%) Gaps:110/303 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SCCENGRPI--MTDPVSGQTVCSCQYD-----SARLALSSYSRLPAA--------SVGVYGTPYP 180
            ||.:...||  :.|...|   |...:|     |..||    ...||:        |....|||.|
Zfish   179 SCLKGKMPIDLVIDERDG---CKSDFDDLSGSSTNLA----DHNPASWRDMDDAHSTPSVGTPGP 236

  Fly   181 STDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVS 245
            |:..:..|| |.:||.....|.|  .|...|.|.|                              
Zfish   237 SSGGHASQS-GDNSSELGDGLDN--SLASPGTGDE------------------------------ 268

  Fly   246 NSSYGASYDLAARRKNATRESTAT--LKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN 308
                 ...|...::|.......||  ::|||.:|..:|||::.:|..||..|.:|..||:.||.|
Zfish   269 -----DDQDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTNLQVNNWFIN 328

  Fly   309 ARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDAIDEDQ 373
            ||||:.:.         ..|..:.|:                |||:             |...|.
Zfish   329 ARRRIVQP---------MIDQSNRAV----------------SQGT-------------AYSPDG 355

  Fly   374 KCLGQANILRAGF---GYPSAGSGSGGYPGGGGSSSGHPGGYH 413
            :.:|       ||   |....|...||..||.|.:.|..|.:|
Zfish   356 QPMG-------GFVLDGQQHMGLRPGGPMGGMGMNMGMDGQWH 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 18/38 (47%)
meis2bNP_570985.1 Meis_PKNOX_N 112..195 CDD:293102 5/15 (33%)
Homeobox_KN 293..332 CDD:283551 18/38 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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