DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and Pknox2

DIOPT Version :10

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_683752.2 Gene:Pknox2 / 208076 MGIID:2445415 Length:474 Species:Mus musculus


Alignment Length:301 Identity:64/301 - (21%)
Similarity:108/301 - (35%) Gaps:104/301 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMG--AWTSAGLQPTTGYYSYDP 235
            |.|....||.:.:....:....::.....:||.|:....:..:.|  |.|:...|..:|...|.|
Mouse   182 GPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGGALYQP 246

  Fly   236 MS-------------AYGGLLVSNSSYGASYDLAARRKNATRES-----------TATLKAWLNE 276
            ::             ..|.:.:.|:.  .:.||.:...|..::|           |..:::||.:
Mouse   247 VTMVTSQGQVVTQAIPQGAIQIQNTQ--VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQ 309

  Fly   277 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL---------------KKENKMTWEPKNR 326
            |..:||||:.||..:|..|.:||.||:.||.|||||:               .|:.|....|..|
Mouse   310 HLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQR 374

  Fly   327 -------------------TDDD----------------------------DDALVSDDEKDKED 344
                               |:.|                            ||:|...:|:|::|
Mouse   375 FWPNSIAAGVLQQQGGTPGTNPDGSINLDNLQSLSSDNATMAMQQAMMAAHDDSLDGTEEEDEDD 439

  Fly   345 LEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAG 385
            :|              |.:|||:.::|:...|...|:...|
Mouse   440 ME--------------EEEEEEEELEEEADELQTTNVSDLG 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 COG5576 <237..>318 CDD:227863 30/119 (25%)
Homeobox_KN 274..312 CDD:428673 19/37 (51%)
Pknox2NP_683752.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
PLN02983 <3..>66 CDD:215533
Meis_PKNOX_N 96..181 CDD:465140
Homeobox_KN 307..345 CDD:428673 19/37 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..371 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..405 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..474 15/58 (26%)
Blue background indicates that the domain is not in the aligned region.

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