DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and unc-62

DIOPT Version :10

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001024169.1 Gene:unc-62 / 178845 WormBaseID:WBGene00006796 Length:564 Species:Caenorhabditis elegans


Alignment Length:426 Identity:85/426 - (19%)
Similarity:140/426 - (32%) Gaps:140/426 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VNEALVMTNAPAMSP-TGGQDCQGSQPSGGAGG----------------DASSGALSPNALSQNS 84
            |.:....::.|.||| :.|.....|.||...|.                ..::|.:..:.:..:|
 Worm   213 VGDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSS 277

  Fly    85 NAATVVG-----AGGGSSAGGGGPADLATGGSLDGN-GVGTTPTAGGAGGGGSCCENGRPIMTDP 143
            .|.::.|     |...||:...|...||.||:|... |...|..........:|...|....:.|
 Worm   278 MAYSMAGMAAAAASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTP 342

  Fly   144 VSGQTVCSCQYDSARLALSSYSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLK 208
            :||:                             ||....:.|...||......|....||..| :
 Worm   343 LSGE-----------------------------TPMGHANGNSMDSISEAGDEFSVCGSNDDG-R 377

  Fly   209 DTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNSSYGASYDLAARRKNATRESTATLKAW 273
            |:                                ::|:|:.|:........|..::|:....:||
 Worm   378 DS--------------------------------VLSDSANGSQNGKRKVPKVFSKEAITKFRAW 410

  Fly   274 LNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDD 338
            |..:..:|||::.:|..||..|.:|:.||:.||.|||||:.:.         ..|.::.|     
 Worm   411 LFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRRIVQP---------MIDQNNRA----- 461

  Fly   339 EKDKEDLEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGY----P 399
                       |..|.:::.|:..:      :..::..|.:         |.:||.||..    |
 Worm   462 -----------GRSGQMNVCKNRRR------NRSEQSPGPS---------PDSGSDSGANYSPDP 500

  Fly   400 GGGGSSSGHPGGYHPYHHQHPA--YYQAGQQGGMLP 433
            ....:|:..|         :||  |.|.....|..|
 Worm   501 SSLAASTAMP---------YPAEFYMQRTMPYGGFP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 COG5576 <237..>318 CDD:227863 25/80 (31%)
Homeobox_KN 274..312 CDD:428673 16/37 (43%)
unc-62NP_001024169.1 Meis_PKNOX_N 133..219 CDD:465140 1/5 (20%)
Homeobox_KN 411..449 CDD:428673 16/37 (43%)

Return to query results.
Submit another query.