Protein Alignment ara and Meis1

DIOPT Version :10

• Sequence 1: NP_524045.2
• Gene: ara / 39439
• FlyBaseID: FBgn0015904
• Length: 717
• Species: Drosophila melanogaster
• Sequence 2: NP_034919.1
• Gene: Meis1 / 17268
• MGIID: 104717
• Length: 465
• Species: Mus musculus
• Alignment Length: 295
• Identity: 73/295 - (24%)
• Similarity: 108/295 - (36%)
• Gaps: 72/295 - (24%)

  Fly   213 GPEMGAWTSAGLQPTTGYYSYDPMSAYGGLL---VSNSSYGASYDLAARRKNATRE------STA 268
            ||..|..||         :|.|..|..|..|   |::.|.|...|....:|...:.      :|.
Mouse   230 GPSSGGHTS---------HSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATN 285

  Fly   269 TLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDA 333
            .::|||.:|..:|||::.:|..||..|.:|:.||:.||.|||||:.:.          ..|..:.
Mouse   286 IMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP----------MIDQSNR 340

  Fly   334 LVSDDEKDKEDLEPSKGSQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGY 398
            .||.......|.:|..|                 .:.:.|:.:|    :||    |...|..|.|
Mouse   341 AVSQGTPYNPDGQPMGG-----------------FVMDGQQHMG----IRA----PGLQSMPGEY 380

  Fly   399 PGGGGS---SSGHPGGYHPYHHQHPAYYQAG-QQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVP 459
            ...||.   |.|.|.........|||..:.| .....:|.|..:..:....|.|..      |:|
Mouse   381 VARGGPMGVSMGQPSYTQAQMPPHPAQLRHGPPMHTYIPGHPHHPAVMMHGGQPHP------GMP 439

  Fly   460 IPATKPKIWSLADTVGCKTPPPAYMGHQSMPLQQQ 494
            :.|:.|.:.:..|..         |..|.|.:..|
Mouse   440 MSASSPSVLNTGDPT---------MSAQVMDIHAQ 465

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ara	NP_524045.2	COG5576	<237..>318	CDD:227863	30/89 (34%)
		Homeobox_KN	274..312	CDD:428673	17/37 (46%)
Meis1	NP_034919.1	Meis_PKNOX_N	108..192	CDD:465140
		Homeobox_KN	291..329	CDD:428673	17/37 (46%)
		PABP-1234	<326..457	CDD:130689	37/180 (21%)