DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and pknox1.2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_005171069.1 Gene:pknox1.2 / 170445 ZFINID:ZDB-GENE-020123-1 Length:445 Species:Danio rerio


Alignment Length:285 Identity:64/285 - (22%)
Similarity:103/285 - (36%) Gaps:114/285 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GTPY---PSTDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPEMGAWTSAGLQPT---TGYYSYD 234
            |:||   |:..|||           ::...:|.|:....:..:.|..|...:.||   ||...|.
Zfish   176 GSPYSPSPTQPQNP-----------FTGAMSPQGIVVPASALQQGNVTVTAVNPTQMVTGGTVYQ 229

  Fly   235 PMSAY-------------GGLLVSNS----------SYGASYDLAARRKNA--TRESTATLKAWL 274
            |::..             |.:.:.||          |:.:..|.:::.|..  .:.:|..:::||
Zfish   230 PVTVVTPQGQVVTQTLSPGTVRIQNSQLQLQLNQDLSFFSQEDGSSKAKRGILPKHATNVMRSWL 294

  Fly   275 NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL---------------KKENKMTWEPK 324
            .:|..:||||:.||..:|:.|.:||.||:.||.|||||:               ||:...| .|.
Zfish   295 FQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRILQPMLDASSSDTPKSKKKTPQT-RPL 358

  Fly   325 NR----------------------------------------------------TDDDDDALVSD 337
            .|                                                    ::||||   .|
Zfish   359 QRFWPNSLASSVSQQQVTMEDGTTVTVGVGEDGLQTLSSDGATLAMQQVMMGGHSEDDDD---ED 420

  Fly   338 DEKDKEDLEPSKGSQGSVSLAKDET 362
            ||:| ||.:||......:.|...::
Zfish   421 DEED-EDTDPSHSDMSRLGLETSDS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 20/38 (53%)
pknox1.2XP_005171069.1 Meis_PKNOX_N 91..175 CDD:293102
Homeobox_KN 293..332 CDD:283551 20/38 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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