DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and Irx3

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001240751.1 Gene:Irx3 / 16373 MGIID:1197522 Length:522 Species:Mus musculus


Alignment Length:509 Identity:161/509 - (31%)
Similarity:208/509 - (40%) Gaps:146/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GAGGGSSAG-----GGGPADLATGGSLDGNGVGTTPTAGGAGGGGSCCENGRPIMTDPVSGQTVC 150
            |.|||||||     |.|.::||..|||                                  ..|.
Mouse    25 GGGGGSSAGGRSGPGAGASELAASGSL----------------------------------SNVL 55

  Fly   151 SCQYDSARLALSSYSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSPLSNPYGLKDTGAGPE 215
            |..|.:...|.::    .||:...||...|...:.|          .:..|...|.|||: .|.:
Mouse    56 SSVYGAPYAAAAA----AAAAAQGYGAFLPYATELP----------IFPQLGAQYELKDS-PGVQ 105

  Fly   216 MGAWTSAGLQPTTGYYSY------DPMSAYGGLLVSNSSYGASYDLAARRKNATRESTATLKAWL 274
            ..|..:|...|...:|.|      ||                     :|.||||||||:||||||
Mouse   106 HPATAAAFPHPHPAFYPYGQYQFGDP---------------------SRPKNATRESTSTLKAWL 149

  Fly   275 NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVS--D 337
            |||:|||||||||||||||||||||||||||||||||||||||||||.|::|||::.:|..|  :
Mouse   150 NEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSERE 214

  Fly   338 DEKDKEDLEPSK-----------GSQ---GSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGY 388
            :|.::||.|.||           |.:   |...||.|:..||.|..:.|....| :.:..||..:
Mouse   215 EEDEEEDEEESKRELEMEEEELAGEEEDTGGEGLADDDEDEEIDLENLDSAAAG-SELTLAGAAH 278

  Fly   389 PSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQAGQQG---------GMLPFHGENSKLQTD 444
            .:...|.|.......|.|                 ....:|         .:.|.....::....
Mouse   279 RNGDFGLGPISDCKTSDS-----------------DDSSEGLEDRPLSVLSLAPPPPPVARAPAS 326

  Fly   445 LGDPKNQLGRDCGVPIPAT---KPKIWSLADTV----GCKTPPPAYMGHQ-----SMPLQQQQQQ 497
            ...|.:.|......|.|::   ||||||||:|.    ..:..||...|..     :.|..|....
Mouse   327 PPSPPSSLDPCAPAPAPSSALQKPKIWSLAETATSPDNPRRSPPGAGGSPPGAAVAPPTLQLSPA 391

  Fly   498 QQQQQQAQHQYPPSEAGR----DQQLFNG-AAAPYLRPHTTAYGGFLGATTQQL 546
            ......|.|:...:..|:    ..:.|.| .|.|  |||..:   .||:..|.|
Mouse   392 AAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPAGP--RPHPLS---MLGSAPQHL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
Irx3NP_001240751.1 Homeobox_KN 148..187 CDD:283551 37/38 (97%)
IRO 345..362 CDD:214716 9/16 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 0.375 Domainoid score I8067
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I3968
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5654
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
77.040

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