DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and Irx2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_034704.1 Gene:Irx2 / 16372 MGIID:1197526 Length:474 Species:Mus musculus


Alignment Length:540 Identity:163/540 - (30%)
Similarity:209/540 - (38%) Gaps:201/540 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SC-QYDSARLALSSYSRLPAASVGVYGTPYPS----TDQ------NPYQSIGVDSSA-----FYS 199
            || .|.::.||......|..::.|...:|||.    |.|      :|.| ...|::|     |.|
Mouse    19 SCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAATGFGSPLQ-YSADAAAAAAAGFPS 82

  Fly   200 PLSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGGLLVSNSSYGASYDLAARRKNATR 264
            .:.:||....||               .||..||.|   ||     :::|....:..|.||||||
Mouse    83 YVGSPYDTHTTG---------------MTGAISYHP---YG-----SAAYPYQLNDPAYRKNATR 124

  Fly   265 ESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNRTDD 329
            ::|||||||||||:|||||||||||||||||||||||||||||||||||||||||||.|:|:::|
Mouse   125 DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSED 189

  Fly   330 DD----DALVSDDE---KDKEDLEPSKGSQG--------------------------------SV 355
            :|    ||..|.:|   |.::..|.|...:|                                |.
Mouse   190 EDEDEGDASRSKEESSDKAQDGTETSAEDEGISLHVDSLTDHSCSAESDGEKLPCRAGDALCESG 254

  Fly   356 SLAKDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHP 420
            |..||:.::.||..||:.:|  :.::.                |....:||...|...|.....|
Mouse   255 SECKDKFEDLEDEEDEEDEC--ERDLA----------------PPKPVTSSPLTGVEAPLLSPAP 301

  Fly   421 AYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTV----------- 474
            .....|..||..|.....|.                |.|.||:|||:||||:..           
Mouse   302 EAAPRGGSGGKTPLGSRTSP----------------GAPPPASKPKLWSLAEIATSDLKQPSLGP 350

  Fly   475 GCKTP-------------PPAYMGHQSMPLQQQQQQQQQQQQAQHQYPPSEAGRDQQLFNGAAAP 526
            ||..|             ||....:.:.||           ..:|.|..|              |
Mouse   351 GCGPPGLPAAAAPASTGAPPGGSPYSASPL-----------LGRHLYYTS--------------P 390

  Fly   527 YLRPHTTAYGGFLGATTQQ---LHTTNNSIPYSNMPPQQQQPQQQQQQLQQGGTIHT-------- 580
            :...:|. ||....|...|   .:.|..|.|                    |.|:|.        
Mouse   391 FYGNYTN-YGNLNAALQGQGLLRYNTAASSP--------------------GETLHAMPKAASDT 434

  Fly   581 --TGSSSGPIIPLQFHNRHP 598
              .||.|     |:.|.|.|
Mouse   435 GKAGSHS-----LESHYRPP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 37/38 (97%)
Irx2NP_034704.1 COG5576 <115..217 CDD:227863 72/101 (71%)
Homeobox_KN 133..172 CDD:368670 37/38 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..220 16/42 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..373 32/144 (22%)
IRO 325..342 CDD:214716 9/16 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..461 11/55 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 0.375 Domainoid score I8067
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I3968
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.920

Return to query results.
Submit another query.