DRSC/TRiP Functional Genomics Resources

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Protein Alignment ara and pknox2

DIOPT Version :9

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001120899.1 Gene:pknox2 / 100151724 XenbaseID:XB-GENE-853128 Length:468 Species:Xenopus tropicalis


Alignment Length:298 Identity:66/298 - (22%)
Similarity:103/298 - (34%) Gaps:99/298 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GTPYPSTDQNPYQSIGVDSSAFYSPLS------NPYGLKDTGAGPEMG---AWTSAGLQPTTGYY 231
            |.||  :...|..|:........||.|      ||.|:....:..:.|   ..|....|..:|..
 Frog   180 GGPY--SPNQPSNSLHTQDMLQNSPNSMTGLSNNPQGIVVPASALQQGNISMTTVNSSQVVSGGA 242

  Fly   232 SYDPMS-------------AYGGLLVSNSSYGA-------SYDLAARRKNAT--RESTATLKAWL 274
            .|.|::             ..|.:.:.|:....       |.|..::.|...  :.:|..:::||
 Frog   243 LYQPVAMVTSQGQVVTQAIPQGAIQIQNAQVNLELTSLLDSEDKKSKNKRGVLPKHATNIMRSWL 307

  Fly   275 NEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL---------------KKENKMTWEPK 324
            .:|..:||||:.||..:|..|.:||.||:.||.|||||:               .|:.|....|.
 Frog   308 FQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPT 372

  Fly   325 NR-------------------TDDD------------DDAL--------VSDDEKDKEDLEPSKG 350
            .|                   |:.|            .|:|        ..||..|..:.|    
 Frog   373 QRFWPNSIAAGVLQQQGGLPGTNPDGSVNMENLQSLSSDSLTMQQAMMAAHDDSLDGTEEE---- 433

  Fly   351 SQGSVSLAKDETKEEEDAIDEDQKCLGQANILRAGFGY 388
                    :||.:.|||.:::|.:.|...|:...|..:
 Frog   434 --------EDEEEMEEDELEDDSEELQTTNVSDLGLDH 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 Homeobox_KN 273..312 CDD:283551 20/38 (53%)
pknox2NP_001120899.1 Meis_PKNOX_N 95..180 CDD:406806 66/298 (22%)
Homeobox_KN 306..345 CDD:399131 20/38 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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