DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ara and Tgif2lx2

DIOPT Version :10

Sequence 1:NP_524045.2 Gene:ara / 39439 FlyBaseID:FBgn0015904 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001136222.1 Gene:Tgif2lx2 / 100039551 MGIID:3800824 Length:231 Species:Mus musculus


Alignment Length:288 Identity:58/288 - (20%)
Similarity:102/288 - (35%) Gaps:93/288 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 SSYGASYDLAARRK-NATRE----------STATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLT 300
            ||:|...:...:.| :.:||          |...|:.||.||:.|.|||..:|.||:..|.::..
Mouse    19 SSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYL 83

  Fly   301 QVSTWFANARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLAKDETKEE 365
            |||.||.|.|:.|:.|  :.::|.:.:.:...|    :...|:...||:    .|....:|..:.
Mouse    84 QVSNWFVNIRKHLRWE--IRYKPYSLSHEGQAA----NAAQKQHSNPSE----EVKTQFNENADM 138

  Fly   366 ED-----AIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGHPGGYHPYHHQHPAYYQA 425
            :|     ..|.::|.                                      ||....|     
Mouse   139 QDLPLPIRQDSEEKV--------------------------------------PYLESSP----- 160

  Fly   426 GQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGVPIPATKPKIWSLADTVGCKTPPPAYMGHQSMP 490
                        |.|:..:....|.:       .|..|:|  ||..:....:..|.....:..:.
Mouse   161 ------------NQKVIAEDNIEKEE-------KISITEP--WSSPEVAWPEEKPDFSSFYMLVD 204

  Fly   491 LQQQQQQQQQQQQAQHQYPPSEAGRDQQ 518
            :..|:.::.::|:.|:   |:..|..||
Mouse   205 VAVQKAKEMEEQKKQN---PNPQGPQQQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
araNP_524045.2 COG5576 <237..>318 CDD:227863 29/81 (36%)
Homeobox_KN 274..312 CDD:428673 18/37 (49%)
Tgif2lx2NP_001136222.1 Homeobox_KN 59..94 CDD:428673 16/34 (47%)

Return to query results.
Submit another query.