DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sowah and LOC110438397

DIOPT Version :9

Sequence 1:NP_001137943.2 Gene:sowah / 39438 FlyBaseID:FBgn0036302 Length:780 Species:Drosophila melanogaster
Sequence 2:XP_021326384.1 Gene:LOC110438397 / 110438397 -ID:- Length:344 Species:Danio rerio


Alignment Length:367 Identity:94/367 - (25%)
Similarity:141/367 - (38%) Gaps:90/367 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LTHPQSQNEARKRFKTYVTLLSTIKNENNQ---KFLILRKKYVNECPTDEVVERAVAAASGIPEP 97
            ||.....::|:.|.:...|...|..:|.:|   .|.:..|:  :|..|||            |:|
Zfish    14 LTEDGGTHDAQSRHELPETQRPTGTDEADQGRLAFAVNEKE--SEFSTDE------------PKP 64

  Fly    98 SSPGGASLNFDSPMRQPPPYK-PPPMVTSP-PAVSIAKEHQENYQEC-VDEFTAAI-----KRIE 154
            |||..:|    |.......:: .|.:|..| |.:|...:| |..|:| .:|...|:     :.:.
Zfish    65 SSPVSSS----SEQHMIEAFRCNPEVVKQPEPVLSEVFDH-EGRQDCEAEEMMPAVVITQAEEVS 124

  Fly   155 PARLER-RTSVKSEDLDQQEKPEKTSRSNSIDVIDNKENIPRFSFSSEASSASSTSIE-KPEMAD 217
            ..|:|. ..||...|......|...:..:..|::..|        |...|..|.|::. |.::.|
Zfish   125 SDRVEDVFFSVSHTDCTVTASPSDGTELSGSDLLSLK--------SDTLSLISETNVSCKSDVED 181

  Fly   218 PTAPAAVGDVAENPISVKEATRKFNRMASEEEAKIISPPAKKKPEKQLIEEKDSPEVTLAHPKAK 282
            .|.......|    :|:                                    .|.|.| .|..:
Zfish   182 DTRSVTASSV----LSL------------------------------------FPRVQL-EPIER 205

  Fly   283 EWIVSMAKANYQELAKMASEYPELVKLQCPATGYTALHWAAKHGNEDVVKLIAGTYKADVNARTN 347
            :|:...|..|...|..:..:.|.||   |..   ||||||||.|..:.|.::| ...||:|.|  
Zfish   206 DWLRCAALGNATTLYLLLQQDPTLV---CRK---TALHWAAKQGRVETVDMMA-RRGADINQR-- 261

  Fly   348 GGYTPLHLATQFGRDNIFELLWNVYKANRDIMDWSGNKPLDY 389
            .||||||||:..|.:.:.:||.|.|.|..:|.|:.|.....|
Zfish   262 AGYTPLHLASIHGHEQVLQLLINNYNAKVNIRDYHGKMAAHY 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowahNP_001137943.2 Ank_4 289..333 CDD:290365 17/43 (40%)
ANK <315..393 CDD:238125 33/75 (44%)
Ank_4 315..368 CDD:290365 24/52 (46%)
ANK repeat 315..346 CDD:293786 14/30 (47%)
ANK repeat 348..380 CDD:293786 15/31 (48%)
LOC110438397XP_021326384.1 Ank_5 132..>282 CDD:330893 51/207 (25%)
ANK 210..310 CDD:238125 40/103 (39%)
ANK repeat 234..262 CDD:293786 15/30 (50%)
ANK repeat 263..294 CDD:293786 15/30 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1531345at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.