DRSC/TRiP Functional Genomics Resources

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Protein Alignment sowah and sowahd

DIOPT Version :10

Sequence 1:NP_001137943.2 Gene:sowah / 39438 FlyBaseID:FBgn0036302 Length:780 Species:Drosophila melanogaster
Sequence 2:XP_017952056.1 Gene:sowahd / 101731056 XenbaseID:XB-GENE-22069172 Length:296 Species:Xenopus tropicalis


Alignment Length:248 Identity:67/248 - (27%)
Similarity:107/248 - (43%) Gaps:49/248 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 TSVKSEDLDQ-QEKPEKTSRSNSIDVIDNKENIPRFSFSSEASSASSTSIEKPEMADPT-APAAV 224
            |.|::|:..: |.......|.|:   :..:|||          ..||..:.:.|.|:.| :||.:
 Frog     8 TWVRTEESGEFQNSHGGNKRGNN---VCRQENI----------RTSSPMVRRTESANRTPSPATI 59

  Fly   225 GDVAENPISVKEATRKFNRMASEEEAKIISPP------------AKKKPEKQLIEEKDSPEVTLA 277
                         :|:...|.....:...|.|            |...||:|.::...|..|  .
 Frog    60 -------------SRRKRGMRGSVWSTAGSLPLRGACISAASFDAIDGPEEQTLDSAVSSLV--L 109

  Fly   278 HPKAKEWIVSMAKANYQELAKMASEYPELVKLQCPATGYTALHWAAKHG-NEDVVKLI-----AG 336
            .|....|::..|:.|:.||.:.....|.|:..:...|||:.:||.|||| :||::|::     .|
 Frog   110 DPNEHAWMLIAAEGNFDELKEFLWLDPSLLYKRDFVTGYSIIHWMAKHGHHEDLIKVMDFACDTG 174

  Fly   337 TYKADVNARTNGGYTPLHLATQFGRDNIFELLWNVYKANRDIMDWSGNKPLDY 389
             |..|:|.|.:||.||||:|...|...:.::|...:.||....|.:|.||..|
 Frog   175 -YTLDINVRDSGGLTPLHIAALQGHVMVVKVLVGAFNANIHARDHNGLKPWQY 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowahNP_001137943.2 HFD_SF <126..>169 CDD:480273 3/6 (50%)
ANKYR <315..>393 CDD:440430 32/81 (40%)
ANK repeat 315..346 CDD:293786 15/36 (42%)
ANK repeat 348..380 CDD:293786 11/31 (35%)
sowahdXP_017952056.1 ANKYR 100..>226 CDD:440430 42/128 (33%)
ANK repeat 115..142 CDD:293786 7/26 (27%)
ANK repeat 144..183 CDD:293786 16/39 (41%)
ANK repeat 185..217 CDD:293786 11/31 (35%)

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