DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4069 and hcfc2

DIOPT Version :10

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001314768.1 Gene:hcfc2 / 550401 ZFINID:ZDB-GENE-050417-203 Length:708 Species:Danio rerio


Alignment Length:378 Identity:89/378 - (23%)
Similarity:141/378 - (37%) Gaps:119/378 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 KSRKWERIAAPNGPSPRS--GHRMTVSKKRLFIFGGFHDNNQSYHYFNDVHIFSLESYQWLKAEI 228
            |...|:|:.:..||.||:  |||....::.|.:|||.::.     ...|:|:::..:.||....:
Zfish     4 KGPLWKRVRSYAGPVPRARHGHRAVAIRELLVVFGGGNEG-----IATDLHVYNSVTKQWFLPAV 63

  Fly   229 GGAIVPSPRSGC------CIAASPEG-KIYVWGG------YSRAAMKKEADRGVTHTDMFVLSQD 280
            .|.|.|    ||      |     || :|.|:||      |:.:..:.:|.|             
Zfish    64 RGDIPP----GCAAHGFVC-----EGTRILVFGGMVEFGQYTNSLYELQASR------------- 106

  Fly   281 KNAGDADNKYKWAPVKP----GGYKPKPRSSVGCTVAANGKAYTFGGVMDVDEDDEDVHG---QF 338
                     :.|..:||    .|..|.||.....|:.|| |.|.|||:.:   |.||.:|   ::
Zfish   107 ---------WLWKKLKPRPPKNGSLPCPRIGHSFTLHAN-KCYLFGGMAN---DSEDPNGNIPRY 158

  Fly   339 GDDLLAFDLTSQT----WRLQEIQTKSSSAEKKDSEESKDVEMSAVDKPVTTTTDGIFTVTVGGP 399
            .||....:|.:|:    |.:.|  ||......::|..|                    .|..|..
Zfish   159 LDDFYELELQAQSGVKGWNVPE--TKGGGPSARESHSS--------------------VVYCGKG 201

  Fly   400 STSTTPFV------SKIPSLF----------AKPKPTNVPSPRMNPGMCVCKGTLYIFGG---IF 445
            .:|...::      .::..|:          ..|....:|.||......|....||:|||   |.
Zfish   202 GSSPRLYIFGGMCGDRLNDLWQLDIETMTWSLPPTRGQLPLPRSLHTSNVIGNKLYVFGGWVPIG 266

  Fly   446 EEDD-------KQLTYNDFYALDLHKLEWKVLIPNSLKGHE--WEDSDSSSSD 489
            ||::       |.:..|....|:...|.|..|.|..   |:  ..:.|.:::|
Zfish   267 EEEEALAADGVKWICTNSLSMLNFDTLTWHNLTPEE---HQQGLVEQDENNAD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 NanM 64..353 CDD:442289 56/212 (26%)
KELCH repeat 69..120 CDD:276965
KELCH repeat 124..179 CDD:276965 3/12 (25%)
KELCH repeat 305..353 CDD:276965 17/54 (31%)
Kelch_5 423..463 CDD:433528 15/49 (31%)
KELCH repeat 426..470 CDD:276965 15/53 (28%)
hcfc2NP_001314768.1 KELCH repeat 244..318 CDD:276965 20/76 (26%)
FN3 <539..>675 CDD:442628
NanM 8..263 CDD:442289 75/316 (24%)
KELCH repeat 22..60 CDD:276965 11/42 (26%)
KELCH repeat 72..122 CDD:276965 14/76 (18%)
KELCH repeat 126..186 CDD:276965 21/65 (32%)
NanM 186..>350 CDD:442289 29/154 (19%)
KELCH repeat 189..240 CDD:276965 7/70 (10%)
Blue background indicates that the domain is not in the aligned region.

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