DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4069 and klhdc10

DIOPT Version :10

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001016816.1 Gene:klhdc10 / 549570 XenbaseID:XB-GENE-1014477 Length:411 Species:Xenopus tropicalis


Alignment Length:428 Identity:97/428 - (22%)
Similarity:159/428 - (37%) Gaps:125/428 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KTVEW-----------RQLKSPS--------GPTPRSGHQMVAVASNGGELWMFGG------EHA 147
            |.|.|           ..|:.||        .|..||||:.||..:|   |::|||      |..
 Frog    26 KKVRWFPVRRLFTHSCPSLRIPSRFLREGRRSPPARSGHRCVADNTN---LYVFGGYNPDYDESG 87

  Fly   148 SPSQLQFHHYKDLWKFALKSRKWERIAAPNGPSPRS---------GHRMTVSKKRLFIFGG---- 199
            .|....:..:::||::...:..|.::.. :|..||.         ||       .|.:|||    
 Frog    88 GPENEDYPLFRELWRYHFATGMWHQMGT-DGHMPRELASMSLVLHGH-------NLLVFGGTGIP 144

  Fly   200 FHDNNQSYHYFNDVHIFSLESYQWLKAEIGGAIVPSPRSGCCIAASPEGKIYVWGGYSRAAMKKE 264
            |.::|.     |||::.:::..:|.|....|. .|:...|..:|.. .|.:||:||         
 Frog   145 FGESNG-----NDVYVCNVKYKRWSKLNCRGK-KPNRIYGQAMAII-HGFLYVFGG--------- 193

  Fly   265 ADRGVTHTDMFVLSQDKNAGDADNKYKWAPVKPGGYKPK---PRSSVGCTVAANG-KAYTFGGVM 325
                   |..::.|.|.:..|...: :|..:||.  .|.   |.......:|.:| :.|..||..
 Frog   194 -------TTGYIYSTDLHRLDLSTR-EWIQLKPN--NPPCDLPEERYRHEIAHDGQRIYVLGGGT 248

  Fly   326 D-VDEDDEDVHGQFGDDLLAFDLTSQTWRLQEIQTKS------SSAEKKDSEESKDVEMSAVDKP 383
            . .....|.:|        |::..:.||  ::|.||.      .:|.:..|    .|::    |.
 Frog   249 SWTAYSLEKIH--------AYNFETNTW--EDIPTKPYGNLGFPAARRCHS----CVQI----KN 295

  Fly   384 VTTTTDGIFTVTVGGP----STSTTPFVSKIPSLFAKPKPTNVPSPRMNPGMCVCKGTLYIFGGI 444
            ......|...:.:.|.    ...|..: :|:|:|.  |:|.......:.|..|     :||.||:
 Frog   296 EVFICGGYNGLVILGDLWKLDLQTFQW-TKLPALM--PEPAYFHCAAVTPAGC-----MYIHGGV 352

  Fly   445 FEEDDKQLTYNDFYALDLHKLEWKVLIPNSLKGHEWED 482
            ......:.|.:      |.|: |  |:..||....||:
 Frog   353 VNIQQNKRTGS------LFKI-W--LVVPSLLELCWEN 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 NanM 64..353 CDD:442289 66/287 (23%)
KELCH repeat 69..120 CDD:276965 6/30 (20%)
KELCH repeat 124..179 CDD:276965 16/60 (27%)
KELCH repeat 305..353 CDD:276965 9/49 (18%)
Kelch_5 423..463 CDD:433528 7/39 (18%)
KELCH repeat 426..470 CDD:276965 10/43 (23%)
klhdc10NP_001016816.1 NanM 58..354 CDD:442289 82/358 (23%)
KELCH repeat 61..120 CDD:276965 17/62 (27%)
Kelch 1 72..133 13/64 (20%)
KELCH repeat 124..172 CDD:276965 14/60 (23%)
Kelch 2 135..186 15/57 (26%)
KELCH repeat 177..225 CDD:276965 15/67 (22%)
Kelch 3 187..239 14/70 (20%)
KELCH repeat 229..282 CDD:276965 13/62 (21%)
Kelch 4 240..288 12/57 (21%)
KELCH repeat 285..329 CDD:276965 8/52 (15%)
Kelch 5 296..342 8/48 (17%)
Kelch 6 345..388 14/51 (27%)

Return to query results.
Submit another query.