DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4069 and rabepk

DIOPT Version :9

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001002209.1 Gene:rabepk / 431756 ZFINID:ZDB-GENE-040704-52 Length:351 Species:Danio rerio


Alignment Length:292 Identity:73/292 - (25%)
Similarity:111/292 - (38%) Gaps:50/292 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 HPE----KEELIMFGGELYTGTKTTVYNDLFFYNTKTVEWRQLKSPSGPTPRSGHQMVAVASNGG 137
            |.|    |.::::.||...:|:    :.|.:..|..|.:| .|....|...|..|......|...
Zfish    45 HDEDGGGKGKIVIVGGANPSGS----FADSYIINLDTHQW-DLPDWEGLQARYEHCSFTPESEPQ 104

  Fly   138 ELWMFGGEHASPSQ--LQFHHYKDLWKFALKSRKWERIAAPN-GPSPRSGHRMTVS-KKRLFIFG 198
            .||:|||...|.::  :|...:.|..:   ..|.|:.:.... .||.|:.|..:.. ..|||:|.
Zfish   105 SLWVFGGAEKSTNRNCVQALRFSDGGE---GRRFWQSVQVTGVPPSGRTYHTNSACVGNRLFVFS 166

  Fly   199 GFHDNNQSYHYFND--VHIFSLESYQWLKAEIGGAIVPSPRSGCCIAASPEGKIYVWGGYSRAAM 261
            |....:.:   ..|  :|:|...|..|.:.:..|. .|:.|.|..|.| ....||:.||.|....
Zfish   167 GGEAGSSA---VTDAQLHVFDAVSVTWTQPDTTGT-PPAQRHGHVITA-VGSDIYIHGGMSGEKF 226

  Fly   262 KKEADRGVTHTDMFVLSQDKNAGDADNKYKWAPVKPGGYKPKPRSSVGCTVAANGKAYTFGGVMD 326
                     |:|||.|:.:        ..||..||..|..| |..:...:|..|...:.||| |.
Zfish   227 ---------HSDMFTLNTE--------SLKWQKVKAKGDLP-PGVAAHSSVTFNKNIFIFGG-MT 272

  Fly   327 VDEDDEDVHGQFGDDLLAFDLTSQTWRLQEIQ 358
            .|...        :.:..|....|.|.|.:.:
Zfish   273 ADGAT--------NSMFKFQCDKQRWTLLKFE 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 KELCH repeat 69..120 CDD:276965 11/46 (24%)
Kelch_3 80..132 CDD:290151 12/51 (24%)
KELCH repeat 124..179 CDD:276965 13/57 (23%)
Kelch_3 136..189 CDD:290151 14/55 (25%)
Kelch_3 191..244 CDD:290151 15/54 (28%)
Kelch_2 237..297 CDD:284956 17/59 (29%)
KELCH repeat 305..353 CDD:276965 9/47 (19%)
Kelch_5 423..463 CDD:290565
KELCH repeat 426..470 CDD:276965
rabepkNP_001002209.1 Kelch 1 54..102 11/52 (21%)
Kelch 2 105..156 14/53 (26%)
KELCH repeat 149..199 CDD:276965 13/53 (25%)
Kelch_3 159..211 CDD:290151 16/56 (29%)
Kelch 3 162..210 14/51 (27%)
KELCH repeat 203..250 CDD:276965 19/64 (30%)
Kelch_1 203..243 CDD:279660 16/57 (28%)
Kelch 4 214..263 18/66 (27%)
KELCH repeat 253..293 CDD:276965 10/48 (21%)
Kelch_3 262..311 CDD:290151 10/44 (23%)
Kelch 5 264..313 9/42 (21%)
Kelch 6 328..351
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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