DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4069 and Klhdc3

DIOPT Version :10

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_038939750.1 Gene:Klhdc3 / 363192 RGDID:1307105 Length:398 Species:Rattus norvegicus


Alignment Length:272 Identity:68/272 - (25%)
Similarity:107/272 - (39%) Gaps:53/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LYTGTKTT--VYNDLFFYNTKTVEWRQLKSP--SGPTP--RSGHQMVAVASNGGELWMFGGEHAS 148
            |:.|...|  ..|.|:.::..|.:|   .:|  ||..|  |.||....:   |..:::|||.   
  Rat    91 LWGGRNDTEGACNVLYAFDVNTHKW---STPRVSGTVPGARDGHSACVL---GKIMYIFGGY--- 146

  Fly   149 PSQLQFHHYKDLWKFALKSRKWERIAAPNGPSP-RSGHRMTVSKKRLFIFGG-------FHDNNQ 205
             .||......|:.|....:..|..:.....|:. |..|..|:....:::|||       ||.||:
  Rat   147 -EQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFHSATMLGNHMYVFGGRADRFGPFHSNNE 210

  Fly   206 SYHYFNDVHIFSLESYQWLKAEIGGAIVPSPRSGCCIAASPEGKIYVWGGYSRAAMKKEADRGVT 270
            .  |.|.:.:|...:..||.......:....||..  |....|::|::|||: |.:.:.      
  Rat   211 I--YCNRIRVFDTRTEAWLDCPHTPVLPEGRRSHS--AFGYNGELYIFGGYN-ARLNRH------ 264

  Fly   271 HTDMFVLSQDKNAGDADNKYKWAPVKPGGYKPKPRSSVGCTVAANGKAYTFGGVMDVDEDDEDVH 335
            ..|::..    |.|    .:.|..::|.|..|.||....|.:..: |...|||.....|:.    
  Rat   265 FHDLWKF----NPG----SFTWKKIEPKGKGPCPRRRQCCCIVGD-KIVLFGGTSPSPEEG---- 316

  Fly   336 GQFGDDLLAFDL 347
              .||:   |||
  Rat   317 --LGDE---FDL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 NanM 64..353 CDD:442289 68/272 (25%)
KELCH repeat 69..120 CDD:276965 8/33 (24%)
KELCH repeat 124..179 CDD:276965 12/54 (22%)
KELCH repeat 305..353 CDD:276965 12/43 (28%)
Kelch_5 423..463 CDD:433528
KELCH repeat 426..470 CDD:276965
Klhdc3XP_038939750.1 NanM 14..308 CDD:442289 60/246 (24%)
KELCH repeat 14..62 CDD:276965
KELCH repeat 77..124 CDD:276965 10/35 (29%)
KELCH repeat 128..173 CDD:276965 12/51 (24%)
KELCH repeat 180..236 CDD:276965 15/57 (26%)
KELCH repeat 239..283 CDD:276965 13/60 (22%)
Blue background indicates that the domain is not in the aligned region.

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