DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4069 and HCFC2

DIOPT Version :9

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_037452.1 Gene:HCFC2 / 29915 HGNCID:24972 Length:792 Species:Homo sapiens


Alignment Length:511 Identity:106/511 - (20%)
Similarity:176/511 - (34%) Gaps:168/511 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PTPRSNFTLVCHPEKEELIMFGGELYTGTKTTVYNDLFFYNTKTVEWRQLKSPSGPTPR--SGHQ 128
            |.||:.........:|.:|:|||    |.: .:.::|..|||.|.:| .|.:..|..|.  :.|.
Human    18 PVPRARHGHRAVAIRELMIIFGG----GNE-GIADELHVYNTATNQW-FLPAVRGDIPPGCAAHG 76

  Fly   129 MVAVASNGGELWMFGGEHASPSQLQFHHY-KDLWKFALKSRKWERI---AAPNG--PSPRSGHRM 187
            .|.   :|..:.:|||      .:::..| .:|::.......|:::   ..|:|  |.||.||..
Human    77 FVC---DGTRILVFGG------MVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSF 132

  Fly   188 TVSKKRLFIFGGF-----HDNNQSYHYFNDVHIFSLES----YQWLKAEIGGAIVPSPRSG---- 239
            ::...:.::|||.     ..||....|.||.:...|:.    ..| ...:...:|||||..    
Human   133 SLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGW-SIPVTKGVVPSPRESHTAV 196

  Fly   240 -CCIAASPEGKIYVWGGYSRAAMKKEADRGVTHTDMFVLSQDKNAGDADNKYKWAPVKPGGYKPK 303
             .|...|...|:||:||...|.:          .|::.|..:        ...|:..:..|..|.
Human   197 IYCKKDSGSPKMYVFGGMCGARL----------DDLWQLDLE--------TMSWSKPETKGTVPL 243

  Fly   304 PRSSVGCTVAANGKAYTFGGVM-----DVDEDDEDVHGQFGDDLLAFDLTSQTWRLQEIQTKSSS 363
            |||....:|..| |.|.|||.:     :.:....|...:........:|.:..|      |...|
Human   244 PRSLHTASVIGN-KMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEW------TTLVS 301

  Fly   364 AEKKDSEESKDVEMSAVDKPVTTTTDGIFTVTVGGPSTSTTPFVSKIPSLFAKPKPTNVPSPRMN 428
            ..::|.:.|:                                                   ||..
Human   302 DSQEDKKNSR---------------------------------------------------PRPR 315

  Fly   429 PGMC-VCKGT-LYIFGGIFEED------DKQLTYNDFYALDLHK------------------LEW 467
            .|.| |..|| ||.:.|   .|      :.|:...|.:.||..|                  ::|
Human   316 AGHCAVAIGTRLYFWSG---RDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKW 377

  Fly   468 KVLIPNSLKG----------HEWEDSDSSSS--------DEECSGSEEDISSSSSD 505
            ..:  ::::|          ::...||||::        |....||...:.:|.:|
Human   378 DEV--STVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSIND 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 KELCH repeat 69..120 CDD:276965 14/50 (28%)
Kelch_3 80..132 CDD:290151 17/53 (32%)
KELCH repeat 124..179 CDD:276965 11/62 (18%)
Kelch_3 136..189 CDD:290151 14/58 (24%)
Kelch_3 191..244 CDD:290151 16/66 (24%)
Kelch_2 237..297 CDD:284956 12/64 (19%)
KELCH repeat 305..353 CDD:276965 11/52 (21%)
Kelch_5 423..463 CDD:290565 15/47 (32%)
KELCH repeat 426..470 CDD:276965 16/69 (23%)
HCFC2NP_037452.1 PLN02193 <2..262 CDD:177844 70/278 (25%)
KELCH repeat 23..69 CDD:276965 14/51 (27%)
Kelch 1 34..79 15/50 (30%)
Kelch 2 83..130 11/52 (21%)
KELCH repeat 127..186 CDD:276965 13/59 (22%)
Kelch_3 136..198 CDD:290151 15/62 (24%)
KELCH repeat 190..241 CDD:276965 13/68 (19%)
Kelch 3 207..255 15/65 (23%)
Kelch_3 207..253 CDD:290151 14/63 (22%)
KELCH repeat 245..312 CDD:276965 16/124 (13%)
Kelch_3 254..323 CDD:290151 18/126 (14%)
Kelch 4 257..303 9/51 (18%)
Kelch_5 312..354 CDD:290565 14/44 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..447 9/33 (27%)
FN3 <618..672 CDD:238020
FN3 678..778 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.