DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4069 and hcf-1

DIOPT Version :9

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_501279.1 Gene:hcf-1 / 177560 WormBaseID:WBGene00001827 Length:782 Species:Caenorhabditis elegans


Alignment Length:570 Identity:133/570 - (23%)
Similarity:208/570 - (36%) Gaps:172/570 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 ISESVCPPPTPRSNFTLVCHPEKEELIMFGGELYTGTKTTVYNDLFFYNTKTVEWRQLKSP---- 118
            :.:|..|.|.||.....|.  .||.:::|||    |.:..: ::|..|||:..||   .:|    
 Worm    33 VQQSTGPNPKPRHGHRAVV--LKELIVIFGG----GNEGMI-DELHAYNTQKREW---TAPQCCG 87

  Fly   119 SGPTPRSGHQMVAVASNGGELWMFGGEHASPSQLQFHHY-KDLWKFALKSRKWE-RIAAP----N 177
            ..|||.:....:::   |.:::.|||      ..::..| .||::  |:|.:|| |...|    |
 Worm    88 DVPTPAAAFGAISL---GNKIYRFGG------MTEYGKYTNDLYE--LQSTRWEWRRLNPRVHSN 141

  Fly   178 G--PSPRSGHRMTVSKK--RLFIFGGF-HDNNQSY----HYFNDVHIFSLESYQWLKAEIGGAIV 233
            |  |.||.||...||:|  :.::|||. :|.|...    ||.:|:::.:|...|.|..|...|..
 Worm   142 GHLPCPRIGHSFVVSQKSQKAYVFGGLSNDLNDPKRNVPHYLDDLYVINLSGPQHLIWEKLNATG 206

  Fly   234 PSPRSGCCIAASPEGKIY---------VWGGYSRAAMKKEADRGVTHTDMFVLSQDKNAGDADNK 289
            |.|.|    ..|....||         |:||.:          ||...|::.|:.        |.
 Worm   207 PGPIS----RESHTAVIYEKDSISRMVVYGGMN----------GVRLGDLWYLNL--------NT 249

  Fly   290 YKWAPVK----PGGYKPKPRSSVGCTVAANGKAYTFG-------------------------GVM 325
            ..|..:|    ..|..|.|| |:..:|....|.:.:|                         |..
 Worm   250 LHWTEIKFDDPRTGIPPMPR-SLHSSVLIGDKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCW 313

  Fly   326 DVDED----------DEDV--HGQFGDDLLAFDLTSQTWRLQEIQTKSSSAEK--KD-------- 368
            ::.||          |||.  .|:.|....|.......|..::...|:.|.:.  :|        
 Worm   314 NITEDRWVPLHLYCSDEDTIPRGRAGHCAAAVGDRMYIWSGRDGYRKAWSNQVCCRDMWLLDTIL 378

  Fly   369 SEESKDVEMS-------AVDKPVTTTTDGIFTVTVG---------GPSTSTTPFVSKIPSLFAKP 417
            .|:...|::.       .:..|:.....|.| :.:|         .|....|....|.||:....
 Worm   379 PEQPGKVQLGRAGFNSLEISWPIVQGASGYF-LQIGFGDAKEQSVSPIKRATTSPRKQPSIVPPS 442

  Fly   418 KPTNVPSPR----MNPGMCVCKGTLYIF----------GG----IFEEDDKQLT-----YNDFYA 459
            :.....||:    ..|.:...:||.|..          ||    :||:.:|..|     .||..:
 Worm   443 QKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATDEGGLPQDLFEDTEKNETASPKRSNDAQS 507

  Fly   460 LDLHKLEWKVLIPNSLKGHEWEDS--DSSSSDEECSGSEEDISSSSSDMD 507
            .|....|.|....:.|:    |||  |...||   :|..:::...:.|.|
 Worm   508 ADSSTCEQKKTDESGLE----EDSEKDQKPSD---AGETDEMKEENGDDD 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 KELCH repeat 69..120 CDD:276965 15/54 (28%)
Kelch_3 80..132 CDD:290151 16/55 (29%)
KELCH repeat 124..179 CDD:276965 15/62 (24%)
Kelch_3 136..189 CDD:290151 20/60 (33%)
Kelch_3 191..244 CDD:290151 17/59 (29%)
Kelch_2 237..297 CDD:284956 14/72 (19%)
KELCH repeat 305..353 CDD:276965 14/84 (17%)
Kelch_5 423..463 CDD:290565 15/62 (24%)
KELCH repeat 426..470 CDD:276965 15/66 (23%)
hcf-1NP_501279.1 Kelch_1 43..81 CDD:279660 15/47 (32%)
KELCH repeat 44..89 CDD:276965 15/54 (28%)
KELCH repeat 93..145 CDD:276965 15/62 (24%)
Kelch_3 102..155 CDD:290151 20/60 (33%)
Kelch_5 145..193 CDD:290565 17/47 (36%)
KELCH repeat 212..267 CDD:276965 14/72 (19%)
Kelch_3 227..277 CDD:290151 16/68 (24%)
KELCH repeat 269..334 CDD:276965 11/65 (17%)
Kelch_5 334..376 CDD:290565 7/41 (17%)
PPP4R2 <488..546 CDD:286293 17/64 (27%)
FN3 <606..635 CDD:238020
FN3 641..739 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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