DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4069 and hcfc2

DIOPT Version :10

Sequence 1:NP_648590.1 Gene:CG4069 / 39437 FlyBaseID:FBgn0036301 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_004912959.2 Gene:hcfc2 / 100127587 XenbaseID:XB-GENE-991080 Length:833 Species:Xenopus tropicalis


Alignment Length:413 Identity:95/413 - (23%)
Similarity:146/413 - (35%) Gaps:127/413 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LKSPSG---PTPRSGHQMVAVASNGGE------LWMFGGE-------HASPSQLQFHHYKDLWKF 163
            :.|||.   |.|.|   ..|....|.|      ||..|.|       .|.|.||           
 Frog    15 ISSPSDSAVPVPAS---PFAAVRPGVEPLRPAALWDGGAEAVGAVMAAAVPVQL----------- 65

  Fly   164 ALKSRKWERIAAPNGPSPRS--GHRMTVSKKRLFIFGGFHDNNQSYHYFNDVHIFSLESYQWLKA 226
                 .|.::.:..||.|||  |||....::.:.|:||.::.     ...::|:::..:.||...
 Frog    66 -----TWGKVLSSTGPEPRSRHGHRAVAIRELMIIYGGGNEG-----IAEELHVYNTATNQWFLP 120

  Fly   227 EIGGAIVPSPRSGC------CIAASPEG-KIYVWGGYSRAAMKKEADRGVTHTDMFVLSQDKNAG 284
            .:.|.|.|    ||      |     :| :|.|:||.        .:.|....|::.|..     
 Frog   121 AVRGDIPP----GCAAHGFVC-----DGTRILVFGGM--------VEFGRYSNDIYELQA----- 163

  Fly   285 DADNKYKWAPVKP----GGYKPKPRSSVGCTVAANG-KAYTFGGVMDVDEDDEDVHGQFGDDLLA 344
               :::.|..:||    .|..|.||  :|.:.:.:| |.|.|||:.:..||..:...::.:||..
 Frog   164 ---SRWLWKKLKPQAPSSGSPPCPR--LGHSFSLHGSKCYLFGGLANESEDTNNNIPRYLNDLYE 223

  Fly   345 FDLTSQT----WRLQEIQTKSSSAEKKDSEESKDVEMSAVDKPVTTTTDG-------------IF 392
            .:|...:    |.:.  .||.:....::|..:.........||......|             |.
 Frog   224 LELRPGSGIVGWNIP--VTKGTPPSPRESHSAVVYCRKDTGKPKLYIFGGMSGCRLADLWELNIE 286

  Fly   393 TVTVGGPSTSTTPFVSKIPSLFAKPKPTNVPSPRMNPGMCVCKGTLYIFGGIFEE---DDKQLT- 453
            |:|...|.:...                 .|.||......:....:|:|||...:   ||..|: 
 Frog   287 TMTWLSPQSKGA-----------------APLPRSLHTANIIGNRMYVFGGWVPQRQCDDSPLSK 334

  Fly   454 ------YNDFYALDLHKLEWKVL 470
                  .|.|..|||.|.||..|
 Frog   335 DNQWKCTNSFSYLDLDKSEWVTL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4069NP_648590.1 NanM 64..353 CDD:442289 65/271 (24%)
KELCH repeat 69..120 CDD:276965 2/4 (50%)
KELCH repeat 124..179 CDD:276965 13/67 (19%)
KELCH repeat 305..353 CDD:276965 13/52 (25%)
Kelch_5 423..463 CDD:433528 14/49 (29%)
KELCH repeat 426..470 CDD:276965 16/53 (30%)
hcfc2XP_004912959.2 NanM 66..389 CDD:442289 78/343 (23%)
KELCH repeat 81..119 CDD:276965 9/42 (21%)
KELCH repeat 131..181 CDD:276965 13/70 (19%)
KELCH repeat 185..245 CDD:276965 16/63 (25%)
KELCH repeat 248..299 CDD:276965 8/67 (12%)
KELCH repeat 303..369 CDD:276965 17/55 (31%)
FN3 <659..>748 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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