DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and yidA

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_418152.1 Gene:yidA / 948204 ECOCYCID:EG11195 Length:270 Species:Escherichia coli


Alignment Length:249 Identity:44/249 - (17%)
Similarity:81/249 - (32%) Gaps:68/249 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFDFIFPE 76
            |:..|:||||.:|...::|..:    :.:......|:                            
E. coli     5 LIAIDMDGTLLLPDHTISPAVK----NAIAAARARGV---------------------------- 37

  Fly    77 NGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQ 141
                           |:::     |..|....|..||.||.:.......|.:...::.....|..
E. coli    38 ---------------NVVL-----TTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGST 82

  Fly   142 CTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLT--YSIGGQISFDVFPHGWDKTYCLRHIEA 204
            ..:..    ..|| :::..||:.:::...|..:|.|  |:....||:......:..|..|...||
E. coli    83 VAQTA----LSYD-DYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEA 142

  Fly   205 -----HYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTEILE 253
                 :.:|.::...   .||...|..|...|:.:..: ||...:.....|||:
E. coli   143 EKMDPNTQFLKVMMI---DEPAILDQAIARIPQEVKEK-YTVLKSAPYFLEILD 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 41/245 (17%)
yidANP_418152.1 PRK10513 1..270 CDD:182509 44/249 (18%)

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