DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and ybjI

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_415365.4 Gene:ybjI / 945470 ECOCYCID:G6442 Length:271 Species:Escherichia coli


Alignment Length:234 Identity:55/234 - (23%)
Similarity:89/234 - (38%) Gaps:34/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNG--RKILNEFDFIF 74
            |:..|:|||....:.....|.....|.::|.:....:|...:   .:.||..  .:|.||..|: 
E. coli     5 LIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGN---QYYQLISFFPEIANEIAFV- 65

  Fly    75 PENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPI------KRGTFIEFRNGMM 133
            .|||...:..||:|..       ||.:...|...|...|:..:|.|      ...|..::.:.|.
E. coli    66 AENGGWVVSEGKDVFN-------GELSKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMK 123

  Fly   134 NVCPIGRQCTREERNMFAEYDIEHK----VREKMI----KDLKQEFADVDLTYSIGGQISFDVFP 190
            .|..:.........|.....||..|    :.:::|    |.|.:...|:.::...|.. |.|:..
E. coli   124 TVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVSVHTGNG-SIDLII 187

  Fly   191 HGWDKTYCLRHIEAHYKF--KEIHFFGDKTEPGGNDYEI 227
            .|..|...||.::..:..  .|:..|||    ||||.|:
E. coli   188 PGVHKANGLRQLQKLWGIDDSEVVVFGD----GGNDIEM 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 55/234 (24%)
ybjINP_415365.4 HAD_YbiV-Like 4..260 CDD:319820 55/234 (24%)

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