DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and SEC53

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_116609.1 Gene:SEC53 / 850499 SGDID:S000001849 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:248 Identity:142/248 - (57%)
Similarity:177/248 - (71%) Gaps:3/248 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFD 71
            ::.|.|:|||||||||..|..|:.|..:.. ::::.:..||.||||||.|..||| |..:|:|||
Yeast    10 EKPETLVLFDVDGTLTPARLTVSEEVRKTL-AKLRNKCCIGFVGGSDLSKQLEQL-GPNVLDEFD 72

  Fly    72 FIFPENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVC 136
            :.|.||||.....|||:..|:.|..||||...:...|:||||||:|:|.:||||:||||||:||.
Yeast    73 YSFSENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFLEFRNGMINVS 137

  Fly   137 PIGRQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRH 201
            ||||..:.||||.|..||.||::|.|.::.||:||.|..||:||||||||||||.||||||||:|
Yeast   138 PIGRNASTEERNEFERYDKEHQIRAKFVEALKKEFPDYGLTFSIGGQISFDVFPAGWDKTYCLQH 202

  Fly   202 IEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTEILEL 254
            :|.. .|||||||||||..|||||||:.|.|||.|.|.:|.||.:||||:..|
Yeast   203 VEKD-GFKEIHFFGDKTMVGGNDYEIFVDERTIGHSVQSPDDTVKILTELFNL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 139/238 (58%)
SEC53NP_116609.1 OtsB 12..>46 CDD:441481 14/34 (41%)
PMM 35..254 CDD:397425 127/221 (57%)

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